RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SLC4A8Q2Y0W8 1093 aa15.49■□□□□ 0.07
SMPD1-202ENST00000526280 CYP4F22Q6NT55 531 aa15.49■□□□□ 0.07
SMPD1-202ENST00000526280 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
SMPD1-202ENST00000526280 EHD4Q9H223 541 aa15.49■□□□□ 0.07
SMPD1-202ENST00000526280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMPD1-202ENST00000526280 DDX60LQ5H9U9 1706 aaKnown RBP15.49■□□□□ 0.07
SMPD1-202ENST00000526280 NAV1Q8NEY1 1877 aa15.49■□□□□ 0.07
SMPD1-202ENST00000526280 FAM196BA6NMK8 535 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 USP17L12C9JPN9 530 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 USP17L21D6R901 530 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 APPP05067 770 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 ECE1P42892 770 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 VEGFBP49765 207 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 VGLL4Q14135 290 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 CTR9Q6PD62 1173 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
SMPD1-202ENST00000526280 IFNL3Q8IZI9 196 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
SMPD1-202ENST00000526280 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 SLC10A4Q96EP9 437 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 CLMNQ96JQ2 1002 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 CAPNS2Q96L46 248 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
SMPD1-202ENST00000526280 SERPINB13Q9UIV8 391 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 SIPA1L1O43166 1804 aa15.48■□□□□ 0.07
SMPD1-202ENST00000526280 BAZ2AQ9UIF9 1905 aaKnown RBP15.48■□□□□ 0.07
SMPD1-202ENST00000526280 FAM155AB1AL88 458 aaPredicted RBP15.47■□□□□ 0.07
SMPD1-202ENST00000526280 FOXP2O15409 715 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 CYP2D6P10635 497 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 INPP5BP32019 993 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 MFAP1P55081 439 aaKnown RBP15.47■□□□□ 0.07
SMPD1-202ENST00000526280 GABPAQ06546 454 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 SBK1Q52WX2 424 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 C12orf60Q5U649 245 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
SMPD1-202ENST00000526280 CRACR2BQ8N4Y2 399 aaPredicted RBP15.47■□□□□ 0.07
SMPD1-202ENST00000526280 NACAP1Q9BZK3 213 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 DNAJC18Q9H819 358 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 CSADQ9Y600 493 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 CCDC171Q6TFL3 1326 aa15.47■□□□□ 0.07
SMPD1-202ENST00000526280 WDR33Q9C0J8 1336 aaKnown RBP15.47■□□□□ 0.07
SMPD1-202ENST00000526280 CYP2D7A0A087X1C5 515 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 CTNND1O60716 968 aaKnown RBP15.46■□□□□ 0.07
SMPD1-202ENST00000526280 SLC10A3P09131 477 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 EVX2Q03828 476 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 NOL9Q5SY16 702 aaKnown RBP15.46■□□□□ 0.07
SMPD1-202ENST00000526280 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 AMOTL1Q8IY63 956 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 ARPP21Q9UBL0 812 aaPredicted RBP15.46■□□□□ 0.07
SMPD1-202ENST00000526280 TAOK2Q9UL54 1235 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 SNCAIPQ9Y6H5 919 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 OTOFQ9HC10 1997 aa15.46■□□□□ 0.07
SMPD1-202ENST00000526280 HSPD1P10809 573 aaKnown RBP15.45■□□□□ 0.06
SMPD1-202ENST00000526280 TDO2P48775 406 aa15.45■□□□□ 0.06
SMPD1-202ENST00000526280 RRP1BQ14684 758 aaKnown RBP15.45■□□□□ 0.06
SMPD1-202ENST00000526280 ALX1Q15699 326 aa15.45■□□□□ 0.06
SMPD1-202ENST00000526280 RUFY2Q8WXA3 655 aa15.45■□□□□ 0.06
SMPD1-202ENST00000526280 NAPBQ9H115 298 aa15.45■□□□□ 0.06
SMPD1-202ENST00000526280 IL25Q9H293 177 aa15.45■□□□□ 0.06
SMPD1-202ENST00000526280 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
SMPD1-202ENST00000526280 RAD50Q92878 1312 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 SMIM22K7EJ46 135 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 CAP2P40123 477 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 GRM1Q13255 1194 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 SPRYD7Q5W111 196 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 TATDN1Q6P1N9 297 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 SCYL3Q8IZE3 742 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 WNK4Q96J92 1243 aa15.44■□□□□ 0.06
SMPD1-202ENST00000526280 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
SMPD1-202ENST00000526280 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 MINDY4BA8MYZ0 360 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 FGAP02671 866 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 SHMT1P34896 483 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 GJA5P36382 358 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 MAP2K2P36507 400 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 NOGQ13253 232 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 DYNLL2Q96FJ2 89 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 SWAP70Q9UH65 585 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 SGSM2O43147 1006 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 AOC2O75106 756 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 ZBTB48P10074 688 aaPredicted RBP15.43■□□□□ 0.06
SMPD1-202ENST00000526280 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 SLC44A5Q8NCS7 719 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 ZIC5Q96T25 663 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 PICK1Q9NRD5 415 aa15.43■□□□□ 0.06
SMPD1-202ENST00000526280 ZMYM6O95789 1325 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 PTPRAP18433 802 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 CDK8P49336 464 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 JAG1P78504 1218 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 PPATQ06203 517 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 CERKLQ49MI3 558 aaPredicted RBP15.42■□□□□ 0.06
SMPD1-202ENST00000526280 DSCC1Q9BVC3 393 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 GINM1Q9NU53 330 aa15.42■□□□□ 0.06
SMPD1-202ENST00000526280 ROBO3Q96MS0 1386 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms