RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 BRD7Q9NPI1 651 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 C11orf16Q9NQ32 467 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 SWAP70Q9UH65 585 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 CYP8B1Q9UNU6 501 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 WASF2Q9Y6W5 498 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 A0A096LPE4 126 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 A0A1W2PPZ6 126 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 UPK3BL1B0FP48 263 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 UPK3BL2E5RIL1 263 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 TRPA1O75762 1119 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 RARAP10276 462 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 ACPPP15309 386 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 ATP4AP20648 1035 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 FAAP100Q0VG06 881 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 FAM209AQ5JX71 171 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 KRBA2Q6ZNG9 492 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 DGKHQ86XP1 1220 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 IFNL3Q8IZI9 196 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 MAGEB6Q8N7X4 407 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 CLUHP3Q96NS8 147 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 PNMA5Q96PV4 448 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 RTFDC1Q9BY42 306 aaPredicted RBP6.9□□□□□ -1.3
USP47-204ENST00000525078 INTS7Q9NVH2 962 aaKnown RBP6.9□□□□□ -1.3
USP47-204ENST00000525078 TOR4AQ9NXH8 423 aa6.9□□□□□ -1.3
USP47-204ENST00000525078 MRPS23Q9Y3D9 190 aaKnown RBP6.9□□□□□ -1.3
USP47-204ENST00000525078 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 ATE1O95260 518 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 ZIC2O95409 532 aaPredicted RBP6.89□□□□□ -1.31
USP47-204ENST00000525078 ALDH1A1P00352 501 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 AVPP01185 164 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 CT47B1P0C2W7 299 aaPredicted RBP6.89□□□□□ -1.31
USP47-204ENST00000525078 SDSP20132 328 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 PTMSP20962 102 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 TARSP26639 723 aaKnown RBP6.89□□□□□ -1.31
USP47-204ENST00000525078 NEK4P51957 841 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 RPL6Q02878 288 aaKnown RBP6.89□□□□□ -1.31
USP47-204ENST00000525078 HYAL2Q12891 473 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 PICALMQ13492 652 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 MAP7Q14244 749 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 KIAA1211LQ6NV74 962 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 FAM9BQ8IZU0 186 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
USP47-204ENST00000525078 ITPKCQ96DU7 683 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 EXOC2Q96KP1 924 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 ZNF576Q9H609 170 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 TAGLN3Q9UI15 199 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 ANAPC4Q9UJX5 808 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 PCDHB10Q9UN67 800 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 POLR3KQ9Y2Y1 108 aaPredicted RBP6.89□□□□□ -1.31
USP47-204ENST00000525078 PHLDB1Q86UU1 1377 aa6.89□□□□□ -1.31
USP47-204ENST00000525078 TBX3O15119 743 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 GPR39O43194 453 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 PSAPP07602 524 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 HSP90AA1P07900 732 aaKnown RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 ZSCAN20P17040 1043 aaPredicted RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 NME2P22392 152 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 BDNFP23560 247 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 RNF144AP50876 292 aaPredicted RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 MORC3Q14149 939 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 MLECQ14165 292 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 STAT4Q14765 748 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 SV2CQ496J9 727 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 INO80DQ53TQ3 878 aaPredicted RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 RASIP1Q5U651 963 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 LHFPL2Q6ZUX7 228 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 AMOTL1Q8IY63 956 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 GPATCH11Q8N954 259 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 TMEM40Q8WWA1 233 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 JPH3Q8WXH2 748 aaPredicted RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 KISS1RQ969F8 398 aaPredicted RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 PHAXQ9H814 394 aaKnown RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 FBRSQ9HAH7 460 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 POLMQ9NP87 494 aaPredicted RBP6.88□□□□□ -1.31
USP47-204ENST00000525078 PRDM10Q9NQV6 1147 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 ATG3Q9NT62 314 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 USP25Q9UHP3 1055 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 DAAM1Q9Y4D1 1078 aa6.88□□□□□ -1.31
USP47-204ENST00000525078 TRBV23-1A0A0A0MS06 115 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 TRAV20A0A0B4J274 112 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 FAM86C2PA6NEL3 165 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 VSTM5A8MXK1 200 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 PRPF3O43395 683 aaKnown RBP6.87□□□□□ -1.31
USP47-204ENST00000525078 BRINP1O60477 761 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 F2P00734 622 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 BMP6P22004 513 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 TMPRSS15P98073 1019 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 PURAQ00577 322 aaKnown RBP6.87□□□□□ -1.31
USP47-204ENST00000525078 POU4F2Q12837 409 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 CCINQ13939 588 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 IL31Q6EBC2 164 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 UNC5AQ6ZN44 842 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
USP47-204ENST00000525078 MYRIPQ8NFW9 859 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 FBXO41Q8TF61 875 aa6.87□□□□□ -1.31
USP47-204ENST00000525078 MRGPRX2Q96LB1 330 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms