RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 RPAP1Q9BWH6 1393 aaPredicted RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 CLRN2A0PK11 232 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 MANSC4A6NHS7 340 aaPredicted RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 SPTLC1O15269 473 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 IFIT1P09914 478 aaKnown RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 UBTFL1P0CB47 393 aaPredicted RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 CRKP46108 304 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 IREB2P48200 963 aaKnown RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 BCAMP50895 628 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 GRIK5Q16478 980 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 QPCTQ16769 361 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 CTU1Q7Z7A3 348 aaKnown RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 VPS37DQ86XT2 251 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 ANKRD13AQ8IZ07 590 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 WDR66Q8TBY9 1149 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 TEKT1Q969V4 418 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 SLC10A4Q96EP9 437 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 WNK4Q96J92 1243 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 TDRD3Q9H7E2 651 aaKnown RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 JAG2Q9Y219 1238 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 PDS5AQ29RF7 1337 aaKnown RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 KIAA0100Q14667 2235 aaKnown RBP7.47□□□□□ -1.21
FAM49B-228ENST00000523993 CDK5RAP2Q96SN8 1893 aa7.47□□□□□ -1.21
FAM49B-228ENST00000523993 FOCADQ5VW36 1801 aa7.46□□□□□ -1.21
FAM49B-228ENST00000523993 PHIPQ8WWQ0 1821 aa7.46□□□□□ -1.21
FAM49B-228ENST00000523993 GPR25O00155 361 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 AP1G2O75843 785 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 SLC5A1P13866 664 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 CD46P15529 392 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 IL15P40933 162 aaPredicted RBP7.46□□□□□ -1.22
FAM49B-228ENST00000523993 TNNI2P48788 182 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 RBM25P49756 843 aaKnown RBP7.46□□□□□ -1.22
FAM49B-228ENST00000523993 RBM5P52756 815 aaKnown RBP eCLIP7.46□□□□□ -1.22
FAM49B-228ENST00000523993 FOSBP53539 338 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 APOBEC3HQ6NTF7 200 aaKnown RBP7.46□□□□□ -1.22
FAM49B-228ENST00000523993 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
FAM49B-228ENST00000523993 CLMNQ96JQ2 1002 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
FAM49B-228ENST00000523993 MYO5AQ9Y4I1 1855 aaKnown RBP7.46□□□□□ -1.22
FAM49B-228ENST00000523993 MOXD2PA6NHM9 499 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 TBC1D8O95759 1140 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 GNAI3P08754 354 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 GJA5P36382 358 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 PDE4CQ08493 712 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.45□□□□□ -1.22
FAM49B-228ENST00000523993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.45□□□□□ -1.22
FAM49B-228ENST00000523993 PBXIP1Q96AQ6 731 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 MEIS3Q99687 375 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 FZD1Q9UP38 647 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
FAM49B-228ENST00000523993 LRRFIP2Q9Y608 721 aaKnown RBP7.45□□□□□ -1.22
FAM49B-228ENST00000523993 MGAMO43451 1857 aa7.45□□□□□ -1.22
FAM49B-228ENST00000523993 ATAD5Q96QE3 1844 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 IGF2BP3O00425 579 aaKnown RBP eCLIP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 IPO8O15397 1037 aaKnown RBP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 LILRB3O75022 631 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 FKTNO75072 461 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 FRAT2O75474 233 aaPredicted RBP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 TRIM27P14373 513 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 HOXB1P14653 301 aaPredicted RBP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 PRSS12P56730 875 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 MLLT1Q03111 559 aaPredicted RBP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 PRKG1Q13976 671 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 ATP2B3Q16720 1220 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 ATF7IPQ6VMQ6 1270 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 ADAMTS19Q8TE59 1207 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 ZDHHC16Q969W1 377 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 HOOK2Q96ED9 719 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 PTPN18Q99952 460 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 TMEM39BQ9GZU3 492 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 R3HDMLQ9H3Y0 253 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 ZCCHC17Q9NP64 241 aaKnown RBP7.44□□□□□ -1.22
FAM49B-228ENST00000523993 DENND2AQ9ULE3 1009 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 DOCK1Q14185 1865 aa7.44□□□□□ -1.22
FAM49B-228ENST00000523993 MAST2Q6P0Q8 1798 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 RCCD1A6NED2 376 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 TCP10L2B9ZVM9 353 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 PATL2C9JE40 543 aaKnown RBP7.43□□□□□ -1.22
FAM49B-228ENST00000523993 NDUFV2P19404 249 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 RFX1P22670 979 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 MAP3K10Q02779 954 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 KCNA1Q09470 495 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 CHAF1AQ13111 956 aaPredicted RBP7.43□□□□□ -1.22
FAM49B-228ENST00000523993 VGLL4Q14135 290 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 OTUD7BQ6GQQ9 843 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 FBXO46Q6PJ61 603 aaPredicted RBP7.43□□□□□ -1.22
FAM49B-228ENST00000523993 ZGPATQ8N5A5 531 aaKnown RBP7.43□□□□□ -1.22
FAM49B-228ENST00000523993 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 FAM151AQ8WW52 585 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 OPTNQ96CV9 577 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 GNL3LQ9NVN8 582 aaKnown RBP7.43□□□□□ -1.22
FAM49B-228ENST00000523993 ZNF112Q9UJU3 913 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 HPS5Q9UPZ3 1129 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 GAKO14976 1311 aa7.43□□□□□ -1.22
FAM49B-228ENST00000523993 RFX7Q2KHR2 1363 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms