RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 MOGSQ13724 837 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 TTF1Q15361 905 aaPredicted RBP19.76■□□□□ 0.75
CLN8-206ENST00000523237 FASTKD5Q7L8L6 764 aaKnown RBP19.76■□□□□ 0.75
CLN8-206ENST00000523237 MAPKAPK5Q8IW41 473 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 MAGEB6Q8N7X4 407 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 ANTXR1Q9H6X2 564 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 AFG3L2Q9Y4W6 797 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 MYH1P12882 1939 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 FLT1P17948 1338 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 A0A0G2JLL6 359 aaPredicted RBP19.75■□□□□ 0.75
CLN8-206ENST00000523237 PRRT2Q7Z6L0 340 aaPredicted RBP19.75■□□□□ 0.75
CLN8-206ENST00000523237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.75■□□□□ 0.75
CLN8-206ENST00000523237 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
CLN8-206ENST00000523237 PTPN22Q9Y2R2 807 aa19.75■□□□□ 0.75
CLN8-206ENST00000523237 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
CLN8-206ENST00000523237 KIF22Q14807 665 aa19.74■□□□□ 0.75
CLN8-206ENST00000523237 C17orf99Q6UX52 265 aa19.73■□□□□ 0.75
CLN8-206ENST00000523237 MIGA1Q8NAN2 632 aa19.73■□□□□ 0.75
CLN8-206ENST00000523237 PARK7Q99497 189 aaKnown RBP19.73■□□□□ 0.75
CLN8-206ENST00000523237 TRIM34Q9BYJ4 488 aa19.73■□□□□ 0.75
CLN8-206ENST00000523237 ZSWIM8A7E2V4 1837 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 TRIM75PA6NK02 468 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 HLA-DOAP06340 250 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 CAP2P40123 477 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 LACTBP83111 547 aaPredicted RBP19.72■□□□□ 0.75
CLN8-206ENST00000523237 CAP1Q01518 475 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 GPAT2Q6NUI2 795 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 GADL1Q6ZQY3 521 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 FOXP4Q8IVH2 680 aaPredicted RBP19.72■□□□□ 0.75
CLN8-206ENST00000523237 CRACR2BQ8N4Y2 399 aaPredicted RBP19.72■□□□□ 0.75
CLN8-206ENST00000523237 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.72■□□□□ 0.75
CLN8-206ENST00000523237 CPA4Q9UI42 421 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 PALD1Q9ULE6 856 aa19.72■□□□□ 0.75
CLN8-206ENST00000523237 USP5P45974 858 aa19.71■□□□□ 0.75
CLN8-206ENST00000523237 CCDC84Q86UT8 332 aaPredicted RBP19.71■□□□□ 0.75
CLN8-206ENST00000523237 DNAJC2Q99543 621 aaKnown RBP19.71■□□□□ 0.75
CLN8-206ENST00000523237 LRRCC1Q9C099 1032 aa19.71■□□□□ 0.75
CLN8-206ENST00000523237 SAP30BPQ9UHR5 308 aaKnown RBP19.71■□□□□ 0.75
CLN8-206ENST00000523237 SLC45A1Q9Y2W3 748 aa19.71■□□□□ 0.75
CLN8-206ENST00000523237 ADGRA2Q96PE1 1338 aa19.71■□□□□ 0.75
CLN8-206ENST00000523237 GOLIM4O00461 696 aa19.7■□□□□ 0.74
CLN8-206ENST00000523237 GNRH1P01148 92 aa19.7■□□□□ 0.74
CLN8-206ENST00000523237 SLC9C2Q5TAH2 1124 aa19.7■□□□□ 0.74
CLN8-206ENST00000523237 METTL16Q86W50 562 aaKnown RBP19.7■□□□□ 0.74
CLN8-206ENST00000523237 LOC285556D6RIA3 1793 aa19.7■□□□□ 0.74
CLN8-206ENST00000523237 USP17L5A8MUK1 530 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 CYP2C8P10632 490 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 PDE6AP16499 860 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 ATP5JP18859 108 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 RRP1BQ14684 758 aaKnown RBP19.69■□□□□ 0.74
CLN8-206ENST00000523237 ZNF280CQ8ND82 737 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 ARHGAP39Q9C0H5 1083 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 AS3MTQ9HBK9 375 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 MGAMO43451 1857 aa19.69■□□□□ 0.74
CLN8-206ENST00000523237 HTTP42858 3142 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 MAGEB6P1A0A0J9YX57 407 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 ASNSP08243 561 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 SPP2Q13103 211 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 PROCA1Q8NCQ7 364 aaPredicted RBP19.68■□□□□ 0.74
CLN8-206ENST00000523237 BOLA2Q9H3K6 86 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 DNAJC18Q9H819 358 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 PAG1Q9NWQ8 432 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 NAV1Q8NEY1 1877 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 MYH7P12883 1935 aa19.68■□□□□ 0.74
CLN8-206ENST00000523237 PRMT2P55345 433 aa19.67■□□□□ 0.74
CLN8-206ENST00000523237 ARMC5Q96C12 935 aa19.67■□□□□ 0.74
CLN8-206ENST00000523237 RIOK1Q9BRS2 568 aaKnown RBP19.67■□□□□ 0.74
CLN8-206ENST00000523237 GINM1Q9NU53 330 aa19.67■□□□□ 0.74
CLN8-206ENST00000523237 PTCH2Q9Y6C5 1203 aa19.67■□□□□ 0.74
CLN8-206ENST00000523237 RBBP6Q7Z6E9 1792 aaKnown RBP19.67■□□□□ 0.74
CLN8-206ENST00000523237 DDX60LQ5H9U9 1706 aaKnown RBP19.66■□□□□ 0.74
CLN8-206ENST00000523237 BCRP11274 1271 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 PSMC4P43686 418 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 SLC4A8Q2Y0W8 1093 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 TTC6Q86TZ1 520 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 SMCR8Q8TEV9 937 aaPredicted RBP19.66■□□□□ 0.74
CLN8-206ENST00000523237 EDC3Q96F86 508 aaKnown RBP19.66■□□□□ 0.74
CLN8-206ENST00000523237 HAUS7Q99871 368 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 ZNF532Q9HCE3 1301 aa19.66■□□□□ 0.74
CLN8-206ENST00000523237 TNRC18O15417 2968 aaPredicted RBP19.65■□□□□ 0.74
CLN8-206ENST00000523237 SMARCA5O60264 1052 aaPredicted RBP19.65■□□□□ 0.74
CLN8-206ENST00000523237 ECM2O94769 699 aaPredicted RBP19.65■□□□□ 0.74
CLN8-206ENST00000523237 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
CLN8-206ENST00000523237 HOXD10P28358 340 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 HMGCS2P54868 508 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 NBPF11Q86T75 865 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 WDR18Q9BV38 432 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 CRNKL1Q9BZJ0 848 aaKnown RBP19.65■□□□□ 0.74
CLN8-206ENST00000523237 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
CLN8-206ENST00000523237 EHD4Q9H223 541 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 DCTPP1Q9H773 170 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 SERPINB13Q9UIV8 391 aa19.65■□□□□ 0.74
CLN8-206ENST00000523237 TCRBV5S4A2TA0A5A2 114 aa19.64■□□□□ 0.73
CLN8-206ENST00000523237 GDF11O95390 407 aa19.64■□□□□ 0.73
CLN8-206ENST00000523237 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
CLN8-206ENST00000523237 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms