RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 BACH1O14867 736 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 VAMP4O75379 141 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 HCLS1P14317 486 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-216ENST00000521918 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-216ENST00000521918 ALDH1B1P30837 517 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 C1QTNF8P60827 252 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 CCDC93Q567U6 631 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 TMEM164Q5U3C3 297 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 G2E3Q7L622 706 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 ZNF295-AS1Q8N0V1 137 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 TSEN2Q8NCE0 465 aaKnown RBP7.6□□□□□ -1.19
SPIDR-216ENST00000521918 FAM200AQ8TCP9 573 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 ZNF526Q8TF50 670 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-216ENST00000521918 TAOK3Q9H2K8 898 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 NMRK2Q9NPI5 230 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 TRMT112Q9UI30 125 aaKnown RBP7.6□□□□□ -1.19
SPIDR-216ENST00000521918 IQSEC3Q9UPP2 1182 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-216ENST00000521918 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 LTBP1Q14766 1721 aa7.6□□□□□ -1.19
SPIDR-216ENST00000521918 SH3TC1Q8TE82 1336 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 A6NJY4 79 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 IGKV5-2P06315 115 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 FOXK2Q01167 660 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 FKBP4Q02790 459 aaKnown RBP eCLIP7.59□□□□□ -1.19
SPIDR-216ENST00000521918 EXOSC9Q06265 439 aaKnown RBP7.59□□□□□ -1.19
SPIDR-216ENST00000521918 TLR1Q15399 786 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 TNS4Q8IZW8 715 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 PSMD1Q99460 953 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 METTL22Q9BUU2 404 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-216ENST00000521918 CHMP4AQ9BY43 222 aa7.59□□□□□ -1.19
SPIDR-216ENST00000521918 TAF1P21675 1872 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 PI4KAP2A4QPH2 592 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 GLTPD2A6NH11 291 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 FIGNL2A6NMB9 653 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 SOBPA7XYQ1 873 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 TCERG1O14776 1098 aaKnown RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 PCCAP05165 728 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 SF3B3Q15393 1217 aaKnown RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 KSR2Q6VAB6 950 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 PI4KAP1Q8N8J0 262 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 RPGRQ92834 1020 aaKnown RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 ZNF428Q96B54 188 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 RBM17Q96I25 401 aaKnown RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 MYD88Q99836 296 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 MYH16Q9H6N6 1097 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 SCHIP1Q9P0W5 487 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 MAP3K2Q9Y2U5 619 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
SPIDR-216ENST00000521918 PCNTO95613 3336 aa7.58□□□□□ -1.2
SPIDR-216ENST00000521918 CDHR2Q9BYE9 1310 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 CDK2AP1O14519 115 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 DDX58O95786 925 aaKnown RBP7.57□□□□□ -1.2
SPIDR-216ENST00000521918 GRAPQ13588 217 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 ZBTB38Q8NAP3 1195 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-216ENST00000521918 RETREG2Q8NC44 543 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 GRAPLQ8TC17 118 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-216ENST00000521918 ZSCAN10Q96SZ4 725 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-216ENST00000521918 STK31Q9BXU1 1019 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 RTFDC1Q9BY42 306 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-216ENST00000521918 ZNF277Q9NRM2 450 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-216ENST00000521918 ATP6V0A2Q9Y487 856 aa7.57□□□□□ -1.2
SPIDR-216ENST00000521918 KDM2BQ8NHM5 1336 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 ZNF541Q9H0D2 1346 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 NEURL1BA8MQ27 555 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 IRS4O14654 1257 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 MAN1A2O60476 641 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 IARSP41252 1262 aaKnown RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 CASP7P55210 303 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 SWI5Q1ZZU3 235 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 CWF19L2Q2TBE0 894 aaKnown RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 LYSMD3Q7Z3D4 306 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 TRMT2AQ8IZ69 625 aaKnown RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 CELF1Q92879 486 aaKnown RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 CWC25Q9NXE8 425 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-216ENST00000521918 MYH3P11055 1940 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 ADAMTSL1Q8N6G6 1762 aa7.56□□□□□ -1.2
SPIDR-216ENST00000521918 CARNS1A5YM72 827 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 E9PSI1 815 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 FZD9O00144 591 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 LGR5O75473 907 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 BBOX1O75936 387 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 TOMM70O94826 608 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 SLFN5Q08AF3 891 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.55□□□□□ -1.25e-6■□□□□ 9.7
SPIDR-216ENST00000521918 DDX46Q7L014 1031 aaKnown RBP7.55□□□□□ -1.2
SPIDR-216ENST00000521918 PRICKLE2Q7Z3G6 844 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 SP8Q8IXZ3 490 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 RHBDD1Q8TEB9 315 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 RTL9Q8NET4 1388 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 SCN4AP35499 1836 aa7.55□□□□□ -1.2
SPIDR-216ENST00000521918 H7C1W4 665 aa7.54□□□□□ -1.2
SPIDR-216ENST00000521918 PDE8AO60658 829 aa7.54□□□□□ -1.2
SPIDR-216ENST00000521918 DDNO94850 711 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms