RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 TSEN2Q8NCE0 465 aaKnown RBP8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 PRKRIP1Q9H875 184 aaPredicted RBP8.5□□□□□ -1.05
RUNX1T1-234ENST00000521553 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 TUBGCP6Q96RT7 1819 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 CABP4P57796 275 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 R3HDM1Q15032 1099 aaKnown RBP8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 WDR43Q15061 677 aaKnown RBP eCLIP8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 MTHFSDQ2M296 383 aaKnown RBP8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 MAP3K5Q99683 1374 aa8.49□□□□□ -1.05
RUNX1T1-234ENST00000521553 ADAMTS7Q9UKP4 1686 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 MAPK8IP3Q9UPT6 1336 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 POM121CA8CG34 1229 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 C21orf2O43822 256 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 ATP9BO43861 1147 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 AFF1P51825 1210 aaKnown RBP8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 SIX5Q8N196 739 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 ADAMTS19Q8TE59 1207 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 PIGBQ92521 554 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 STK32BQ9NY57 414 aa8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 CCNL1Q9UK58 526 aaPredicted RBP8.48□□□□□ -1.05
RUNX1T1-234ENST00000521553 SIPA1L3O60292 1781 aaPredicted RBP8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 QSER1Q2KHR3 1735 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 ERVV-2B6SEH9 535 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 PSAPL1Q6NUJ1 521 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 SMARCC1Q92922 1105 aaPredicted RBP8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 PNMA5Q96PV4 448 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 C2orf49Q9BVC5 232 aaPredicted RBP8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 PNNQ9H307 717 aaKnown RBP8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 DNAJB12Q9NXW2 375 aaKnown RBP8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 MRC1P22897 1456 aa8.47□□□□□ -1.05
RUNX1T1-234ENST00000521553 C4BP0C0L5 1744 aa8.46□□□□□ -1.05
RUNX1T1-234ENST00000521553 CASZ1Q86V15 1759 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 ARID1BQ8NFD5 2236 aaPredicted RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 GNAT3A8MTJ3 354 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 RNMTO43148 476 aaKnown RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 TEFQ10587 303 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 ZNF594Q96JF6 807 aaPredicted RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 PHACTR3Q96KR7 559 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 UCN2Q96RP3 112 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 ASAP1Q9ULH1 1129 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 COL5A3P25940 1745 aaPredicted RBP8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 TJP1Q07157 1748 aa8.46□□□□□ -1.06
RUNX1T1-234ENST00000521553 TAL1P17542 331 aaPredicted RBP8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 SSTR4P31391 388 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 CCINQ13939 588 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 FMR1NBQ8N0W7 255 aaPredicted RBP8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 KRTAP4-9Q9BYQ8 210 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 LGR6Q9HBX8 967 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 UBR2Q8IWV8 1755 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 ZNF831Q5JPB2 1677 aa8.45□□□□□ -1.06
RUNX1T1-234ENST00000521553 LRP5O75197 1615 aa8.44□□□□□ -1.06
RUNX1T1-234ENST00000521553 DKK1O94907 266 aa8.44□□□□□ -1.06
RUNX1T1-234ENST00000521553 SLC15A2Q16348 729 aa8.44□□□□□ -1.06
RUNX1T1-234ENST00000521553 ZNF827Q17R98 1081 aa8.44□□□□□ -1.06
RUNX1T1-234ENST00000521553 SLC52A2Q9HAB3 445 aa8.44□□□□□ -1.06
RUNX1T1-234ENST00000521553 ATG3Q9NT62 314 aa8.44□□□□□ -1.06
RUNX1T1-234ENST00000521553 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 PTCD1O75127 700 aaKnown RBP8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 SIK1P57059 783 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 PCSK7Q16549 785 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 IER5Q5VY09 327 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 MCM10Q7L590 875 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 SLC51AQ86UW1 340 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 TTC5Q8N0Z6 440 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 MRS2Q9HD23 443 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 TFCP2L1Q9NZI6 479 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 UBR3Q6ZT12 1888 aa8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 CICQ96RK0 1608 aaPredicted RBP8.43□□□□□ -1.06
RUNX1T1-234ENST00000521553 NFKB1P19838 968 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 SEC13P55735 322 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 SLC39A6Q13433 755 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 DCTN1Q14203 1278 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 FAM35AQ86V20 835 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 PLEKHF1Q96S99 279 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 NAGPAQ9UK23 515 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 KCPQ6ZWJ8 1503 aa8.42□□□□□ -1.06
RUNX1T1-234ENST00000521553 LAMB4A4D0S4 1761 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 KDM3BQ7LBC6 1761 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 ZBTB7AO95365 584 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 RASA1P20936 1047 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 RTN1Q16799 776 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 PRR23CQ6ZRP0 262 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
RUNX1T1-234ENST00000521553 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms