RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 L3MBTL3Q96JM7 780 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-208ENST00000520561 TRIM34Q9BYJ4 488 aa10.58□□□□□ -0.72
CSMD1-208ENST00000520561 ADARB2Q9NS39 739 aaKnown RBP10.58□□□□□ -0.72
CSMD1-208ENST00000520561 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-208ENST00000520561 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
CSMD1-208ENST00000520561 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.72
CSMD1-208ENST00000520561 IQCA1LA6NCM1 817 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 GLTPD2A6NH11 291 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 ORC4O43929 436 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 CPA1P15085 419 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 EPS15P42566 896 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 PLCD1P51178 756 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 C16orf86Q6ZW13 317 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 FAM83AQ86UY5 434 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 APOBEC3FQ8IUX4 373 aaKnown RBP10.57□□□□□ -0.72
CSMD1-208ENST00000520561 CRACR2BQ8N4Y2 399 aaPredicted RBP10.57□□□□□ -0.72
CSMD1-208ENST00000520561 FAM151AQ8WW52 585 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 EHD4Q9H223 541 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 MKNK2Q9HBH9 465 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 SWAP70Q9UH65 585 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 SERPINB13Q9UIV8 391 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 TAOK2Q9UL54 1235 aa10.57□□□□□ -0.72
CSMD1-208ENST00000520561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSMD1-208ENST00000520561 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 K7ELQ4 463 aaPredicted RBP10.56□□□□□ -0.72
CSMD1-208ENST00000520561 PRC1O43663 620 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
CSMD1-208ENST00000520561 KDM4AO75164 1064 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 PRDM1O75626 825 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 EGFRP00533 1210 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 SART3Q15020 963 aaKnown RBP10.56□□□□□ -0.72
CSMD1-208ENST00000520561 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
CSMD1-208ENST00000520561 IQCA1Q86XH1 822 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 TCEANC2Q96MN5 208 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 TTC14Q96N46 770 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 CSRNP1Q96S65 589 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 UBAC1Q9BSL1 405 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 GGA3Q9NZ52 723 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 PI4KBQ9UBF8 816 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 SCN4AP35499 1836 aa10.56□□□□□ -0.72
CSMD1-208ENST00000520561 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 ERICH2A1L162 156 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 DDTLA6NHG4 134 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-208ENST00000520561 TSPY2A6NKD2 308 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 FGRP09769 529 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 CDK8P49336 464 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 AK2P54819 239 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 EVX2Q03828 476 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 ANGEL2Q5VTE6 544 aaKnown RBP10.55□□□□□ -0.72
CSMD1-208ENST00000520561 Q6ZUG5 572 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 ZFPM1Q8IX07 1006 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 SLC44A5Q8NCS7 719 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 DYNLL2Q96FJ2 89 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 TMEM87BQ96K49 555 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 IPO9Q96P70 1041 aaKnown RBP10.55□□□□□ -0.72
CSMD1-208ENST00000520561 MTA3Q9BTC8 594 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 SIPA1L1O43166 1804 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 PITPNM2Q9BZ72 1349 aa10.55□□□□□ -0.72
CSMD1-208ENST00000520561 MYH8P13535 1937 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 TSPY3P0CV98 308 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 TSPY8P0CW00 308 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 EPHX2P34913 555 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 ANTXR2P58335 489 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 GABPAQ06546 454 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 RASA3Q14644 834 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 TMEM67Q5HYA8 995 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 USP50Q70EL3 339 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 CYB5R4Q7L1T6 521 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 FOXP4Q8IVH2 680 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 ZNF444Q8N0Y2 327 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 TMEM39BQ9GZU3 492 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 ALDH8A1Q9H2A2 487 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 INCENPQ9NQS7 918 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 HERC5Q9UII4 1024 aaKnown RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 PPP2R3BQ9Y5P8 575 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 TACC3Q9Y6A5 838 aa10.54□□□□□ -0.72
CSMD1-208ENST00000520561 ASTN2O75129 1339 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-208ENST00000520561 PLIN4Q96Q06 1357 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 SH2B2O14492 632 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 IFIT3O14879 490 aaKnown RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 RASA1P20936 1047 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 EXOSC10Q01780 885 aaKnown RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 COL9A3Q14050 684 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 WTAPQ15007 396 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 BRF1Q92994 677 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 DCPSQ96C86 337 aaKnown RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-208ENST00000520561 ZSWIM5Q9P217 1185 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 ANGEL1Q9UNK9 670 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms