RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 DISC1Q9NRI5 854 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 PCOLCE2Q9UKZ9 415 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 CYP8B1Q9UNU6 501 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 PCDHGC5Q9Y5F6 944 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 LMNB1P20700 586 aa6.89□□□□□ -1.31
SQLE-204ENST00000520493 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
SQLE-204ENST00000520493 OGFOD3Q6PK18 319 aa6.89□□□□□ -1.31
SQLE-204ENST00000520493 SEZ6L2Q6UXD5 910 aa6.89□□□□□ -1.31
SQLE-204ENST00000520493 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
SQLE-204ENST00000520493 TOX2Q96NM4 488 aa6.89□□□□□ -1.31
SQLE-204ENST00000520493 C1GALT1Q9NS00 363 aa6.89□□□□□ -1.31
SQLE-204ENST00000520493 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
SQLE-204ENST00000520493 CFPP27918 469 aa6.88□□□□□ -1.31
SQLE-204ENST00000520493 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
SQLE-204ENST00000520493 PCNX4Q63HM2 1172 aa6.88□□□□□ -1.31
SQLE-204ENST00000520493 RNF214Q8ND24 703 aa6.88□□□□□ -1.31
SQLE-204ENST00000520493 PAGE1O75459 146 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 CELA3AP09093 270 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 BMP6P22004 513 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 CDK5R2Q13319 367 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
SQLE-204ENST00000520493 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 ARHGAP27Q6ZUM4 889 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.87□□□□□ -1.31
SQLE-204ENST00000520493 GRIN3AQ8TCU5 1115 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 ELMO3Q96BJ8 720 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 FAM84AQ96KN4 292 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 DUSP9Q99956 384 aaKnown RBP6.87□□□□□ -1.31
SQLE-204ENST00000520493 PCDHA4Q9UN74 947 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 JAG2Q9Y219 1238 aa6.87□□□□□ -1.31
SQLE-204ENST00000520493 ITGAEP38570 1179 aa6.86□□□□□ -1.31
SQLE-204ENST00000520493 CCDC85BQ15834 202 aaPredicted RBP6.86□□□□□ -1.31
SQLE-204ENST00000520493 CDC37L1Q7L3B6 337 aa6.86□□□□□ -1.31
SQLE-204ENST00000520493 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
SQLE-204ENST00000520493 ISL2Q96A47 359 aa6.86□□□□□ -1.31
SQLE-204ENST00000520493 ZC3H7BQ9UGR2 993 aaKnown RBP6.86□□□□□ -1.31
SQLE-204ENST00000520493 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
SQLE-204ENST00000520493 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
SQLE-204ENST00000520493 MESP2Q0VG99 397 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 PSMD2Q13200 908 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
SQLE-204ENST00000520493 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 KCT2Q8NC54 265 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 CACNA2D2Q9NY47 1150 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 LMCD1Q9NZU5 365 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 SLC5A6Q9Y289 635 aa6.85□□□□□ -1.31
SQLE-204ENST00000520493 DCDC2CA8MYV0 355 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 FANCGO15287 622 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 NEFMP07197 916 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 ERCC3P19447 782 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 RAP1GAPP47736 663 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 PPM1JQ5JR12 505 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 HDXQ7Z353 690 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 ATG4DQ86TL0 474 aaPredicted RBP6.84□□□□□ -1.31
SQLE-204ENST00000520493 STK11IPQ8N1F8 1099 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 CSADQ9Y600 493 aa6.84□□□□□ -1.31
SQLE-204ENST00000520493 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
SQLE-204ENST00000520493 C1QL4Q86Z23 238 aa6.83□□□□□ -1.32
SQLE-204ENST00000520493 LRRC56Q8IYG6 542 aaPredicted RBP6.83□□□□□ -1.32
SQLE-204ENST00000520493 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
SQLE-204ENST00000520493 RLBP1P12271 317 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 RPS26P62854 115 aaKnown RBP6.82□□□□□ -1.32
SQLE-204ENST00000520493 ZBTB37Q5TC79 503 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 TTLL10Q6ZVT0 673 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 C12orf40Q86WS4 652 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 NPAS4Q8IUM7 802 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 TOP6BLQ8N6T0 577 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 NETO1Q8TDF5 533 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 BCL7CQ8WUZ0 217 aaPredicted RBP6.82□□□□□ -1.32
SQLE-204ENST00000520493 MISP3Q96FF7 219 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 RC3H2Q9HBD1 1191 aaKnown RBP6.82□□□□□ -1.32
SQLE-204ENST00000520493 PARP2Q9UGN5 583 aa6.82□□□□□ -1.32
SQLE-204ENST00000520493 PRAMEF27A3QJZ7 478 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 LRRC10BA6NIK2 292 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 DNAJC14Q6Y2X3 702 aaPredicted RBP6.81□□□□□ -1.32
SQLE-204ENST00000520493 SPRED2Q7Z698 418 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 ZNF507Q8TCN5 953 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 BCL11AQ9H165 835 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 MKNK2Q9HBH9 465 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 MRS2Q9HD23 443 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 GTF2IRD1Q9UHL9 959 aa6.81□□□□□ -1.32
SQLE-204ENST00000520493 DAB2P98082 770 aa6.8□□□□□ -1.32
SQLE-204ENST00000520493 RASIP1Q5U651 963 aa6.8□□□□□ -1.32
SQLE-204ENST00000520493 SNCAIPQ9Y6H5 919 aa6.8□□□□□ -1.32
SQLE-204ENST00000520493 LEFTY1O75610 366 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 ST13P50502 369 aaKnown RBP6.79□□□□□ -1.32
SQLE-204ENST00000520493 ETF1P62495 437 aaKnown RBP6.79□□□□□ -1.32
SQLE-204ENST00000520493 RING1Q06587 406 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 IFI16Q16666 785 aaKnown RBP6.79□□□□□ -1.32
SQLE-204ENST00000520493 WIPI1Q5MNZ9 446 aaPredicted RBP6.79□□□□□ -1.32
SQLE-204ENST00000520493 LRFN4Q6PJG9 635 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 TMC4Q7Z404 712 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 SIAH1Q8IUQ4 282 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 BHLHE22Q8NFJ8 381 aaPredicted RBP6.79□□□□□ -1.32
SQLE-204ENST00000520493 PLPPR2Q96GM1 343 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms