RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 PARP3Q9Y6F1 533 aa0.16□□□□□ -2.38
RNU6-1238P-201ENST00000517215 DNAJC25-GNG10A0A024R161 153 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 A0A1B0GTL3 188 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MYADML2A6NDP7 307 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 A6NHS1 94 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 A6NJY4 79 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 IGF2BP3O00425 579 aaKnown RBP eCLIP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NTN3O00634 580 aaPredicted RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 U2SURPO15042 1029 aaKnown RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FOXN1O15353 648 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SMNDC1O75940 238 aaKnown RBP eCLIP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DLGAP3O95886 979 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LMNAP02545 664 aaKnown RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 EPB42P16452 691 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KRT4P19013 534 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 VIPR1P32241 457 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CLCN1P35523 988 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HK2P52789 917 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TROAPQ12815 778 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SNX17Q15036 470 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NR0B2Q15466 257 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SPRED3Q2MJR0 410 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF628Q5EBL2 1059 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 C1orf53Q5VUE5 145 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 OLFML2BQ68BL8 750 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SCARA3Q6AZY7 606 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HIST2H2BCQ6DN03 193 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF517Q6ZMY9 492 aaPredicted RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 Q6ZTC4 211 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF627Q7L945 461 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SAPCD2Q86UD0 394 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZSCAN29Q8IWY8 852 aaPredicted RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ADGRG2Q8IZP9 1017 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF843Q8N446 348 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FIBCD1Q8N539 461 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PNMA1Q8ND90 353 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PDZD8Q8NEN9 1154 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ANKS1AQ92625 1134 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SUSD3Q96L08 255 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NSUN5Q96P11 429 aaKnown RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DUSP23Q9BVJ7 150 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DNAJC25Q9H1X3 360 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ATP13A1Q9HD20 1204 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 WWOXQ9NZC7 414 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RTCBQ9Y3I0 505 aaKnown RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PCDHB9Q9Y5E1 797 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MMP24Q9Y5R2 645 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KMT2DO14686 5537 aa0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 COL3A1P02461 1466 aaPredicted RBP0.15□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF536O15090 1300 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FITM1A5D6W6 292 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NPEPPSL1A6NEC2 478 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FAM177BA6PVY3 158 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PATE3B3GLJ2 98 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LEFTY1O75610 366 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PSAPP07602 524 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PTPRAP18433 802 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MAKP20794 623 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TARSP26639 723 aaKnown RBP0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NOS2P35228 1153 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CABP4P57796 275 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MCCD1P59942 119 aaPredicted RBP0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 C19orf57Q0VDD7 668 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NR6A1Q15406 480 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SF3B4Q15427 424 aaKnown RBP eCLIP0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DIXDC1Q155Q3 683 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HIF1AQ16665 826 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NRN1LQ496H8 165 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RALGPS1Q5JS13 557 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 IER5Q5VY09 327 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CEP135Q66GS9 1140 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ADAMTSL4Q6UY14 1074 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 Q6ZPA2 131 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DYMQ7RTS9 669 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KRT25Q7Z3Z0 450 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CIR1Q86X95 450 aaPredicted RBP0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ULK2Q8IYT8 1036 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LGI4Q8N135 537 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CARFQ8N187 725 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SIMC1Q8NDZ2 872 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HEXIM2Q96MH2 286 aaKnown RBP0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TTPALQ9BTX7 342 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 USP26Q9BXU7 913 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PRDM14Q9GZV8 571 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RIOX1Q9H6W3 641 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 C19orf44Q9H6X5 657 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GTF2IRD1Q9UHL9 959 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LRFN2Q9ULH4 789 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 INVSQ9Y283 1065 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 USP20Q9Y2K6 914 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PCDHA5Q9Y5H7 936 aa0.14□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZAR1LA6NP61 321 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PRSS47A8MTI9 375 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GNAT3A8MTJ3 354 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 H3BNC9 293 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GPR42O15529 346 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 BUB1BO60566 1050 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SASH3O75995 380 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MSL3P1P0C860 447 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PROZP22891 400 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms