RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 ECE1P42892 770 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 MAP3K9P80192 1104 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 RGMBQ6NW40 437 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 METTL16Q86W50 562 aaKnown RBP14.25□□□□□ -0.13
SNF8-215ENST00000515572 CRACR2BQ8N4Y2 399 aaPredicted RBP14.25□□□□□ -0.13
SNF8-215ENST00000515572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNF8-215ENST00000515572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNF8-215ENST00000515572 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
SNF8-215ENST00000515572 SERPINB13Q9UIV8 391 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 ZNF112Q9UJU3 913 aa14.25□□□□□ -0.13
SNF8-215ENST00000515572 CHMLP26374 656 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 HTRA3P83110 453 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 SBK1Q52WX2 424 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 CCDC129Q6ZRS4 1044 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 CCDC102AQ96A19 550 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 WRNIP1Q96S55 665 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 FZD1Q9UP38 647 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 CSADQ9Y600 493 aa14.24□□□□□ -0.13
SNF8-215ENST00000515572 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
SNF8-215ENST00000515572 USP17L21D6R901 530 aa14.23□□□□□ -0.13
SNF8-215ENST00000515572 TDO2P48775 406 aa14.23□□□□□ -0.13
SNF8-215ENST00000515572 ZNF157P51786 506 aaPredicted RBP14.23□□□□□ -0.13
SNF8-215ENST00000515572 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
SNF8-215ENST00000515572 NAPBQ9H115 298 aa14.23□□□□□ -0.13
SNF8-215ENST00000515572 PHF20L1A8MW92 1017 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
SNF8-215ENST00000515572 PLCD1P51178 756 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 VGLL4Q14135 290 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 ALX1Q15699 326 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 NOL9Q5SY16 702 aaKnown RBP14.22□□□□□ -0.13
SNF8-215ENST00000515572 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.22□□□□□ -0.13
SNF8-215ENST00000515572 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
SNF8-215ENST00000515572 ZNF589Q86UQ0 364 aaPredicted RBP14.22□□□□□ -0.13
SNF8-215ENST00000515572 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
SNF8-215ENST00000515572 SWAP70Q9UH65 585 aa14.22□□□□□ -0.13
SNF8-215ENST00000515572 ZMYM6O95789 1325 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 LAMA4Q16363 1823 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 FAM196BA6NMK8 535 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 SLC10A3P09131 477 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
SNF8-215ENST00000515572 INPP5BP32019 993 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 GABPAQ06546 454 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 CYP4F22Q6NT55 531 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 ZKSCAN4Q969J2 545 aaPredicted RBP14.21□□□□□ -0.13
SNF8-215ENST00000515572 CAPNS2Q96L46 248 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 THSD7BQ9C0I4 1608 aa14.21□□□□□ -0.13
SNF8-215ENST00000515572 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.14
SNF8-215ENST00000515572 WDR33Q9C0J8 1336 aaKnown RBP14.2□□□□□ -0.14
SNF8-215ENST00000515572 FOXP2O15409 715 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 SGSM2O43147 1006 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 CDC45O75419 566 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 ZBTB48P10074 688 aaPredicted RBP14.2□□□□□ -0.14
SNF8-215ENST00000515572 CYP2D6P10635 497 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 NOGQ13253 232 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 VPS53Q5VIR6 699 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 RASAL3Q86YV0 1011 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 SCYL3Q8IZE3 742 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 DNAJC5GQ8N7S2 189 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 CLMNQ96JQ2 1002 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
SNF8-215ENST00000515572 SPDYE5A6NIY4 337 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 FAM155AB1AL88 458 aaPredicted RBP14.19□□□□□ -0.14
SNF8-215ENST00000515572 SLC3A2P08195 630 aaKnown RBP14.19□□□□□ -0.14
SNF8-215ENST00000515572 MAP2K2P36507 400 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 CAP2P40123 477 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 VEGFBP49765 207 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 SPRYD7Q5W111 196 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 ERO1BQ86YB8 467 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 ELP3Q9H9T3 547 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 ZNF287Q9HBT7 754 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 PICK1Q9NRD5 415 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 PHIPQ8WWQ0 1821 aa14.19□□□□□ -0.14
SNF8-215ENST00000515572 CYP2D7A0A087X1C5 515 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 FGAP02671 866 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 ASNSP08243 561 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 SLURP2P0DP57 97 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 SHMT1P34896 483 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 PPATQ06203 517 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 CERKLQ49MI3 558 aaPredicted RBP14.18□□□□□ -0.14
SNF8-215ENST00000515572 C16orf86Q6ZW13 317 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
SNF8-215ENST00000515572 OPTNQ96CV9 577 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 WNK4Q96J92 1243 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 ESYT1Q9BSJ8 1104 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 TBC1D2Q9BYX2 928 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 CTNNA3Q9UI47 895 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 GTF3C3Q9Y5Q9 886 aa14.18□□□□□ -0.14
SNF8-215ENST00000515572 PPARAQ07869 468 aa14.17□□□□□ -0.14
SNF8-215ENST00000515572 GRM1Q13255 1194 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms