RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TNIP1Q15025 636 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 MAP3K11Q16584 847 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 HNRNPLLQ8WVV9 542 aaKnown RBP8.61□□□□□ -1.03
CLIP1-205ENST00000514271 JDP2Q8WYK2 163 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 LLPHQ9BRT6 129 aaKnown RBP8.61□□□□□ -1.03
CLIP1-205ENST00000514271 A0A1W2PQ27 194 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 A0A1W2PQ64 194 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 A0A1W2PQD8 194 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 TAF5LO75529 589 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 IFIT1P09914 478 aaKnown RBP8.61□□□□□ -1.03
CLIP1-205ENST00000514271 SLC5A1P13866 664 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLIP1-205ENST00000514271 LDHAL6AQ6ZMR3 332 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 ZNF804AQ7Z570 1209 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 PODNQ7Z5L7 613 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 FCHSD1Q86WN1 690 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 SYNE4Q8N205 404 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 SPATA20Q8TB22 786 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-205ENST00000514271 MYH7BA7E2Y1 1941 aa8.61□□□□□ -1.03
CLIP1-205ENST00000514271 CPA1P15085 419 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 PBX1P40424 430 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 PUM3Q15397 648 aaKnown RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 ARHGAP27Q6ZUM4 889 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 STOX1Q6ZVD7 989 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 NIM1KQ8IY84 436 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 MINPP1Q9UNW1 487 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 PFKFB2O60825 505 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 FDPSP14324 419 aaKnown RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 MAP3K9P80192 1104 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 CELF1Q92879 486 aaKnown RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 ZNF512BQ96KM6 892 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 MED15Q96RN5 788 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 FUT8Q9BYC5 575 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 MAP4K4O95819 1239 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 CEP135Q66GS9 1140 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 LPIN2Q92539 896 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 SCAND2PQ9GZW5 306 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-205ENST00000514271 CHMP3Q9Y3E7 222 aa8.6□□□□□ -1.03
CLIP1-205ENST00000514271 ZNF646O15015 1829 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-205ENST00000514271 ZNF804BA4D1E1 1349 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 VWA3AA6NCI4 1184 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 SRGAP3O43295 1099 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 C21orf2O43822 256 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 ABCB7O75027 752 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 KCNJ4P48050 445 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
CLIP1-205ENST00000514271 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLIP1-205ENST00000514271 TBC1D22AQ8WUA7 517 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 TRAIPQ9BWF2 469 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 ATP6V1DQ9Y5K8 247 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 MAST3O60307 1309 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 NFKBIEO00221 500 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 CHRNDQ07001 517 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 NSUN7Q8NE18 718 aaKnown RBP8.59□□□□□ -1.03
CLIP1-205ENST00000514271 TBC1D16Q8TBP0 767 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
CLIP1-205ENST00000514271 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
CLIP1-205ENST00000514271 A0A0D9SFI3 127 aa8.59□□□□□ -1.04
CLIP1-205ENST00000514271 SH2B2O14492 632 aaPredicted RBP8.59□□□□□ -1.04
CLIP1-205ENST00000514271 PDE8BO95263 885 aa8.59□□□□□ -1.04
CLIP1-205ENST00000514271 TNNT1P13805 278 aa8.59□□□□□ -1.04
CLIP1-205ENST00000514271 ZNF18P17022 549 aa8.59□□□□□ -1.04
CLIP1-205ENST00000514271 ZNF589Q86UQ0 364 aaPredicted RBP8.59□□□□□ -1.04
CLIP1-205ENST00000514271 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.04
CLIP1-205ENST00000514271 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.04
CLIP1-205ENST00000514271 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.04
CLIP1-205ENST00000514271 COL1A1P02452 1464 aaPredicted RBP8.59□□□□□ -1.04
CLIP1-205ENST00000514271 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 FZD9O00144 591 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 IKBKBO14920 756 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 UQCRFS1P1P0C7P4 283 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 CAVIN4Q5BKX8 364 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 METTL24Q5JXM2 366 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 MSANTD4Q8NCY6 345 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 EVI5LQ96CN4 794 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 NUP62CLQ9H1M0 184 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 UFL1O94874 794 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 GPSM2P81274 684 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 WASHC4Q2M389 1173 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 FAM205AQ6ZU69 1335 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 TAF1P21675 1872 aa8.58□□□□□ -1.04
CLIP1-205ENST00000514271 GLRX3O76003 335 aaKnown RBP8.57□□□□□ -1.04
CLIP1-205ENST00000514271 IL1R1P14778 569 aa8.57□□□□□ -1.04
CLIP1-205ENST00000514271 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
CLIP1-205ENST00000514271 GPC2Q8N158 579 aa8.57□□□□□ -1.04
CLIP1-205ENST00000514271 VGLL2Q8N8G2 317 aa8.57□□□□□ -1.04
CLIP1-205ENST00000514271 AGBL3Q8NEM8 1001 aa8.57□□□□□ -1.04
CLIP1-205ENST00000514271 DPF2Q92785 391 aa8.57□□□□□ -1.04
CLIP1-205ENST00000514271 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms