RNA–Protein interactions for RNA: ENST00000513592.5

DDX46-210, Transcript of DEAD-box helicase 46, human

TSL 4

Gene DDX46, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX46-210	ENST00000513592	PLEKHG6	Q3KR16	790 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	MTERF2	Q49AM1	385 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	EFCAB2	Q5VUJ9	269 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	INTS3	Q68E01	1043 aa	Known RBP	4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	RIPOR1	Q6ZS17	1223 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	TTC9	Q92623	222 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	ABHD17A	Q96GS6	310 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	KLHL42	Q9P2K6	505 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	ZMYM5	Q9UJ78	669 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	PCDHB14	Q9Y5E9	798 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	TACC3	Q9Y6A5	838 aa		4.91	□□□□□ -1.62
DDX46-210	ENST00000513592	GFRA2	O00451	464 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	SIN3B	O75182	1162 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	PARN	O95453	639 aa	Known RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	ESRRA	P11474	423 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	PTPRA	P18433	802 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	CD33	P20138	364 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	ZNF157	P51786	506 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	PTPN11	Q06124	597 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	AP3B2	Q13367	1082 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	DALRD3	Q5D0E6	543 aa	Known RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	FBXW10	Q5XX13	1052 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	CEP135	Q66GS9	1140 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	ADAMTSL4	Q6UY14	1074 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	FAM178B	Q8IXR5	827 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	CACTIN-AS1	Q8N1I8	211 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	GRIN3A	Q8TCU5	1115 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	DDX54	Q8TDD1	881 aa	Known RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	TNFRSF25	Q93038	417 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	SOX17	Q9H6I2	414 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	AVEN	Q9NQS1	362 aa	Predicted RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	DNAJB12	Q9NXW2	375 aa	Known RBP	4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	PHF24	Q9UPV7	400 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	PLAA	Q9Y263	795 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	SLC12A7	Q9Y666	1083 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	KDM2B	Q8NHM5	1336 aa		4.9	□□□□□ -1.63
DDX46-210	ENST00000513592	CCDC163	A0A0D9SF12	145 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	MAN1A2	O60476	641 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	TOM1	O60784	492 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	DGAT1	O75907	488 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	FGFR3	P22607	806 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	GUCY2C	P25092	1073 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	TKFC	Q3LXA3	575 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	LARP1B	Q659C4	914 aa	Known RBP	4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	SPATC1	Q76KD6	591 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	TTC6	Q86TZ1	520 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	ZNF837	Q96EG3	531 aa	Predicted RBP	4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	MDFI	Q99750	246 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	EPN3	Q9H201	632 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	FRRS1L	Q9P0K9	344 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	PTCH2	Q9Y6C5	1203 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	SNCAIP	Q9Y6H5	919 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	CAMSAP1	Q5T5Y3	1602 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	RAPGEF6	Q8TEU7	1601 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	ZMYM3	Q14202	1370 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	NPAT	Q14207	1427 aa		4.89	□□□□□ -1.63
DDX46-210	ENST00000513592	TCOF1	Q13428	1488 aa	Known RBP	4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	UPK3BL1	B0FP48	263 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	UPK3BL2	E5RIL1	263 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	DIAPH1	O60610	1272 aa	Known RBP	4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	RGS20	O76081	388 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	DDAH1	O94760	285 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	GSTP1	P09211	210 aa	Known RBP	4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	PDGFRB	P09619	1106 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	SELP	P16109	830 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	MLLT1	Q03111	559 aa	Predicted RBP	4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	NCAPH	Q15003	741 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	MRM1	Q6IN84	353 aa	Known RBP	4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	RUFY4	Q6ZNE9	571 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	HFE2	Q6ZVN8	426 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	SYT9	Q86SS6	491 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	CCDC155	Q8N6L0	562 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	ZSCAN1	Q8NBB4	408 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	ZSWIM2	Q8NEG5	633 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	TMEM40	Q8WWA1	233 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	PDZRN3	Q9UPQ7	1066 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	PPME1	Q9Y570	386 aa		4.88	□□□□□ -1.63
DDX46-210	ENST00000513592	AGL	P35573	1532 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	SAMD9	Q5K651	1589 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	ALK	Q9UM73	1620 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	CTTNBP2	Q8WZ74	1663 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	FAM187A	A6NFU0	413 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	ADARB2-AS1	A8MUL3	147 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	SOX1	O00570	391 aa	Predicted RBP	4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	KCNQ2	O43526	872 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	RFPL3	O75679	317 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	CTBS	Q01459	385 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	SSRP1	Q08945	709 aa	Known RBP	4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	PPP2R5E	Q16537	467 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	TM4SF20	Q53R12	229 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	TMEM67	Q5HYA8	995 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	TMEM201	Q5SNT2	666 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	CDCP2	Q5VXM1	449 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	HGSNAT	Q68CP4	663 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	EEPD1	Q7L9B9	569 aa		4.87	□□□□□ -1.63
DDX46-210	ENST00000513592	SLC26A8	Q96RN1	970 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms