RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 PRDM1O75626 825 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 MCM5P33992 734 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 TNFAIP1Q13829 316 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 FKBP1CQ5VVH2 108 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 ZFPM1Q8IX07 1006 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
LINC01550-203ENST00000512901 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
LINC01550-203ENST00000512901 MB21D2Q8IYB1 491 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-203ENST00000512901 FAM151AQ8WW52 585 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 ESR2Q92731 530 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-203ENST00000512901 DAXXQ9UER7 740 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-203ENST00000512901 HACL1Q9UJ83 578 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
LINC01550-203ENST00000512901 PRC1O43663 620 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 ORC4O43929 436 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 KDM4AO75164 1064 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 COL9A3Q14050 684 aaPredicted RBP12.35□□□□□ -0.43
LINC01550-203ENST00000512901 CHST3Q7LGC8 479 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
LINC01550-203ENST00000512901 SNX21Q969T3 373 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 MYH8P13535 1937 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
LINC01550-203ENST00000512901 MCM2P49736 904 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 AK2P54819 239 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 FAM83AQ86UY5 434 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 TTC14Q96N46 770 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
LINC01550-203ENST00000512901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC01550-203ENST00000512901 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-203ENST00000512901 ASTN2O75129 1339 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-203ENST00000512901 IQCA1LA6NCM1 817 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
LINC01550-203ENST00000512901 FGRP09769 529 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 CDK8P49336 464 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 ANGEL2Q5VTE6 544 aaKnown RBP12.34□□□□□ -0.43
LINC01550-203ENST00000512901 Q6ZUG5 572 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 APOBEC3FQ8IUX4 373 aaKnown RBP12.34□□□□□ -0.43
LINC01550-203ENST00000512901 ZNF444Q8N0Y2 327 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-203ENST00000512901 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 TBC1D2Q9BYX2 928 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 ZSWIM5Q9P217 1185 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 SWAP70Q9UH65 585 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
LINC01550-203ENST00000512901 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 EXOSC10Q01780 885 aaKnown RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 RASA3Q14644 834 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 TMEM39BQ9GZU3 492 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 EHD4Q9H223 541 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 GGA3Q9NZ52 723 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 SCAF8Q9UPN6 1271 aaKnown RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 ATRNL1Q5VV63 1379 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 SCN4AP35499 1836 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 ERICH2A1L162 156 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 K7ELQ4 463 aaPredicted RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 EPHX2P34913 555 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 HIRAP54198 1017 aaPredicted RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 FOXP4Q8IVH2 680 aaPredicted RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
LINC01550-203ENST00000512901 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
LINC01550-203ENST00000512901 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
LINC01550-203ENST00000512901 NT5C2P49902 561 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 ANTXR2P58335 489 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
LINC01550-203ENST00000512901 IQCA1Q86XH1 822 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 BRF1Q92994 677 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 ALDH8A1Q9H2A2 487 aaPredicted RBP12.32□□□□□ -0.44
LINC01550-203ENST00000512901 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 TSPY3P0CV98 308 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 TSPY8P0CW00 308 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 RASA1P20936 1047 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 TFAP4Q01664 338 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 GABPAQ06546 454 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 TMEM67Q5HYA8 995 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
LINC01550-203ENST00000512901 DEFB129Q9H1M3 183 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 LIMCH1Q9UPQ0 1083 aa12.32□□□□□ -0.44
LINC01550-203ENST00000512901 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
LINC01550-203ENST00000512901 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
LINC01550-203ENST00000512901 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-203ENST00000512901 EAPPQ56P03 285 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms