RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 AGBL5Q8NDL9 886 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 NETO1Q8TDF5 533 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 JARID2Q92833 1246 aaPredicted RBP5.45□□□□□ -1.54
CHD1-207ENST00000511628 PLPPR2Q96GM1 343 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 DUSP23Q9BVJ7 150 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 PRDM10Q9NQV6 1147 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 SLC5A6Q9Y289 635 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 GNAT3A8MTJ3 354 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 BPNT1O95861 308 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 LIG3P49916 1009 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 INPP5AQ14642 412 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 LRFN4Q6PJG9 635 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 TMC4Q7Z404 712 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 BCL2L13Q9BXK5 485 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 TPX2Q9ULW0 747 aaKnown RBP5.44□□□□□ -1.54
CHD1-207ENST00000511628 SNCAIPQ9Y6H5 919 aa5.44□□□□□ -1.54
CHD1-207ENST00000511628 ADAMTS4O75173 837 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 PTPN11Q06124 597 aaPredicted RBP5.43□□□□□ -1.54
CHD1-207ENST00000511628 ARMCX6Q7L4S7 300 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 RELL1Q8IUW5 271 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 PLD6Q8N2A8 252 aaKnown RBP5.43□□□□□ -1.54
CHD1-207ENST00000511628 MISP3Q96FF7 219 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 CRELD1Q96HD1 420 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 CACNA2D2Q9NY47 1150 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 PCDHB5Q9Y5E4 795 aa5.43□□□□□ -1.54
CHD1-207ENST00000511628 TMEM265A0A087WTH1 108 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 FAM155AB1AL88 458 aaPredicted RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 PAX4O43316 350 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 PRNPP04156 253 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 GBP2P32456 591 aaPredicted RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 ST13P50502 369 aaKnown RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 PDE4BQ07343 736 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 PLCL1Q15111 1095 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 IFI16Q16666 785 aaKnown RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 TSNAXIP1Q2TAA8 658 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 MCTP1Q6DN14 999 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 AGMOQ6ZNB7 445 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 HID1Q8IV36 788 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 ABI1Q8IZP0 508 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 GIPC2Q8TF65 315 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 HRASLS5Q96KN8 279 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 NOC4LQ9BVI4 516 aaKnown RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 FOXQ1Q9C009 403 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 WNT10AQ9GZT5 417 aa5.42□□□□□ -1.54
CHD1-207ENST00000511628 PRDM5Q9NQX1 630 aaPredicted RBP5.42□□□□□ -1.54
CHD1-207ENST00000511628 F6X3S4 739 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 LRIG2O94898 1065 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 CEACAM5P06731 702 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 GRK4P32298 578 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 PWP1Q13610 501 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 AOC3Q16853 763 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 CYFIP1Q7L576 1253 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 FBXO33Q7Z6M2 555 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 GAL3ST3Q96A11 431 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 MIPEPQ99797 713 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 TLR6Q9Y2C9 796 aa5.41□□□□□ -1.54
CHD1-207ENST00000511628 UNCXA6NJT0 531 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 PGRP06401 933 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 TAL1P17542 331 aaPredicted RBP5.4□□□□□ -1.54
CHD1-207ENST00000511628 CDK8P49336 464 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 CHMP4BP1P59074 171 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 TAGLNQ01995 201 aaKnown RBP5.4□□□□□ -1.54
CHD1-207ENST00000511628 BNIP3Q12983 259 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 ZNF746Q6NUN9 644 aaPredicted RBP5.4□□□□□ -1.54
CHD1-207ENST00000511628 UBE3DQ7Z6J8 389 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 BCL7CQ8WUZ0 217 aaPredicted RBP5.4□□□□□ -1.54
CHD1-207ENST00000511628 MKNK2Q9HBH9 465 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 VAV3Q9UKW4 847 aa5.4□□□□□ -1.54
CHD1-207ENST00000511628 USP31Q70CQ4 1352 aa5.4□□□□□ -1.55
CHD1-207ENST00000511628 TFE3P19532 575 aaPredicted RBP5.39□□□□□ -1.55
CHD1-207ENST00000511628 CYP7A1P22680 504 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 OXCT1P55809 520 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 PRKCQQ04759 706 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 RING1Q06587 406 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 SNAP47Q5SQN1 464 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 ZNF574Q6ZN55 896 aaPredicted RBP5.39□□□□□ -1.55
CHD1-207ENST00000511628 MFSD2AQ8NA29 543 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 PI4K2BQ8TCG2 481 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 PSMG3-AS1Q96PY0 264 aa5.39□□□□□ -1.55
CHD1-207ENST00000511628 COL17A1Q9UMD9 1497 aaPredicted RBP5.39□□□□□ -1.55
CHD1-207ENST00000511628 MINDY4BA8MYZ0 360 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 IGF2BP3O00425 579 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHD1-207ENST00000511628 CTSHP09668 335 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 NTF4P34130 210 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 RPL6Q02878 288 aaKnown RBP5.38□□□□□ -1.55
CHD1-207ENST00000511628 IKZF1Q13422 519 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 SFRP5Q5T4F7 317 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 ANGEL2Q5VTE6 544 aaKnown RBP5.38□□□□□ -1.55
CHD1-207ENST00000511628 PRAMEF13Q5VWM6 474 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 LETMD1Q6P1Q0 360 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 PHC3Q8NDX5 983 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 ASB11Q8WXH4 323 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 FBRSQ9HAH7 460 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 PAK6Q9NQU5 681 aaPredicted RBP5.38□□□□□ -1.55
CHD1-207ENST00000511628 TACC3Q9Y6A5 838 aa5.38□□□□□ -1.55
CHD1-207ENST00000511628 RBM47A0AV96 593 aaKnown RBP5.37□□□□□ -1.55
CHD1-207ENST00000511628 BIN1O00499 593 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms