RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TACC3Q9Y6A5 838 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 N4BP2Q86UW6 1770 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-209ENST00000511124 MRC1P22897 1456 aa3.39□□□□□ -1.87
CLOCK-209ENST00000511124 PDHXO00330 501 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 FGD1P98174 961 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 EPHA10Q5JZY3 1008 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 FAM160B2Q86V87 743 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 MSL3Q8N5Y2 521 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 C7orf43Q8WVR3 580 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 MAF1Q9H063 256 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 DPP7Q9UHL4 492 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 RWDD3Q9Y3V2 267 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 RIPOR2Q9Y4F9 1068 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 RPAP1Q9BWH6 1393 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 UBN2Q6ZU65 1347 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 NEURL1BA8MQ27 555 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 CCL5P13501 91 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 AKAP17AQ02040 695 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 PICALMQ13492 652 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 RCSD1Q6JBY9 416 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 ZBTB33Q86T24 672 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 TRPM4Q8TD43 1214 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 KIF12Q96FN5 646 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 ZDHHC15Q96MV8 337 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 CCDC43Q96MW1 224 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 APBA2Q99767 749 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 H7C1W4 665 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 WNT10BO00744 389 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 IDH1O75874 414 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 HACE1Q8IYU2 909 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 SHCBP1Q8NEM2 672 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 TTLL11Q8NHH1 800 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 CELF1Q92879 486 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 KATNAL1Q9BW62 490 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 GLT8D2Q9H1C3 349 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 TSKSQ9UJT2 592 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 AGTPBP1Q9UPW5 1226 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 COL3A1P02461 1466 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 IRS2Q9Y4H2 1338 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 LOC102724159A0A0B4J2E5 919 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 DLL1O00548 723 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 PDE8BO95263 885 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 SGPL1O95470 568 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 CYP7A1P22680 504 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 PIP4K2AP48426 406 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 LACTBP83111 547 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 PWP2Q15269 919 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 DACT2Q5SW24 774 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 LDLRAD1Q5T700 205 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 MCTP2Q6DN12 878 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 ASTLQ6HA08 431 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 KCNV1Q6PIU1 500 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 SPDYE1Q8NFV5 336 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 ARHGAP45Q92619 1136 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 FAM122AQ96E09 287 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 SAMD11Q96NU1 681 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 POP1Q99575 1024 aaKnown RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 TMEM121BQ9BXQ6 578 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 SLC28A3Q9HAS3 691 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 AAASQ9NRG9 546 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 DDX19BQ9UMR2 479 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 TRPC6Q9Y210 931 aa3.38□□□□□ -1.87
CLOCK-209ENST00000511124 SALL2Q9Y467 1007 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-209ENST00000511124 USP54Q70EL1 1684 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 ZBBXA8MT70 800 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 NBPF26B4DH59 902 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 NKRFO15226 690 aaKnown RBP eCLIP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 MARCH6O60337 910 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 SURF6O75683 361 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 RDXP35241 583 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 TDO2P48775 406 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 NCBP1Q09161 790 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 ABCB5Q2M3G0 1257 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 CERKLQ49MI3 558 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 NOL9Q5SY16 702 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 NCAPG2Q86XI2 1143 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 MCF2L2Q86YR7 1114 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 C7orf61Q8IZ16 206 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 FRAT1Q92837 279 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 MS4A4AQ96JQ5 239 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 TDRD3Q9H7E2 651 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 GPR108Q9NPR9 543 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 TMEM39AQ9NV64 488 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 PDS5AQ29RF7 1337 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 MAGEB6P1A0A0J9YX57 407 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 ZBTB24O43167 697 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 SRGAP3O43295 1099 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 IL1R1P14778 569 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 SDHBP21912 280 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 SLC4A3P48751 1232 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 HTRA3P83110 453 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 TICAM2Q86XR7 235 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 U2AF1L4Q8WU68 220 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 PHACTR3Q96KR7 559 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 DEFB118Q96PH6 123 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 SLC4A9Q96Q91 983 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 PEAK1Q9H792 1746 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms