RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 COL16A1Q07092 1604 aaPredicted RBP16.38■□□□□ 0.21
AP003555.1-202ENST00000511013 CICQ96RK0 1608 aaPredicted RBP16.38■□□□□ 0.21
AP003555.1-202ENST00000511013 CYP7A1P22680 504 aa16.38■□□□□ 0.21
AP003555.1-202ENST00000511013 CHRNDQ07001 517 aa16.38■□□□□ 0.21
AP003555.1-202ENST00000511013 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
AP003555.1-202ENST00000511013 UBAC1Q9BSL1 405 aa16.38■□□□□ 0.21
AP003555.1-202ENST00000511013 PSDA5PKW4 1024 aaPredicted RBP16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 SNAP23O00161 211 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 PPARAQ07869 468 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 ZNF579Q8NAF0 562 aaKnown RBP16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 FANCBQ8NB91 859 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 KIF18AQ8NI77 898 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 ESR2Q92731 530 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 MYH6P13533 1939 aa16.37■□□□□ 0.21
AP003555.1-202ENST00000511013 MAGEB6P1A0A0J9YX57 407 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 BTBD18B2RXH4 712 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 CCP110O43303 1012 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 XBP1P17861 261 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 PNOCQ13519 176 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 ZNF654Q8IZM8 581 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 ZNF592Q92610 1267 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 PTPREP23469 700 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 KANK3Q6NY19 840 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 CLEC4GQ6UXB4 293 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 METTL16Q86W50 562 aaKnown RBP16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 DACH1Q9UI36 760 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
AP003555.1-202ENST00000511013 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 A0A0G2JS52 829 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 USP27XA6NNY8 438 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 SERPINC1P01008 464 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 UBASH3AP57075 661 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 ISM2Q6H9L7 571 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
AP003555.1-202ENST00000511013 GUCY1A2P33402 732 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 NCBP1Q09161 790 aaKnown RBP16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 ITPK1Q13572 414 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 ARMCX5Q6P1M9 558 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 TRMT1Q9NXH9 659 aaKnown RBP16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 FBXO2Q9UK22 296 aaPredicted RBP16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 KCNJ14Q9UNX9 436 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
AP003555.1-202ENST00000511013 MINDY4BA8MYZ0 360 aa16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 SEC23AQ15436 765 aa16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 NUP133Q8WUM0 1156 aa16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 CGNQ9P2M7 1197 aaKnown RBP16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 ABCF2Q9UG63 623 aa16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.21
AP003555.1-202ENST00000511013 CALM1P0DP23 149 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 CALM2P0DP24 149 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 CALM3P0DP25 149 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 TRIML1Q8N9V2 468 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 MLKLQ8NB16 471 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 BRIP1Q9BX63 1249 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 RBM28Q9NW13 759 aaKnown RBP16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.2
AP003555.1-202ENST00000511013 BCL9LQ86UU0 1499 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 ROBO1Q9Y6N7 1651 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 UBE2Q2LH0YL09 131 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 SEMA3EO15041 775 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 RGL2O15211 777 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 BMP15O95972 392 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 POSTNQ15063 836 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 NT5DC1Q5TFE4 455 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 CATIPQ7Z7H3 387 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 MARCH10Q8NA82 808 aaPredicted RBP16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 TNKSO95271 1327 aa16.32■□□□□ 0.2
AP003555.1-202ENST00000511013 CFAP100Q494V2 611 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 E4F1Q66K89 784 aaPredicted RBP16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 FOXP4Q8IVH2 680 aaPredicted RBP16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 PPP1R13BQ96KQ4 1090 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 ZSCAN10Q96SZ4 725 aaPredicted RBP16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 FEZ1Q99689 392 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms