RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 MYPNQ86TC9 1320 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 APBB1O00213 710 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
SCARB2-204ENST00000509994 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-204ENST00000509994 PRMT2P55345 433 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 FCGRTP55899 365 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 PANK1Q8TE04 598 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 TRIM47Q96LD4 638 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 CCDC8Q9H0W5 538 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-204ENST00000509994 GPR108Q9NPR9 543 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
SCARB2-204ENST00000509994 MKI67P46013 3256 aaKnown RBP12.4□□□□□ -0.42
SCARB2-204ENST00000509994 OSBPP22059 807 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 ZAP70P43403 619 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 GPAT2Q6NUI2 795 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 AACSQ86V21 672 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
SCARB2-204ENST00000509994 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 SAP30BPQ9UHR5 308 aaKnown RBP12.39□□□□□ -0.43
SCARB2-204ENST00000509994 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
SCARB2-204ENST00000509994 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-204ENST00000509994 MS4A1P11836 297 aa12.38□□□□□ -0.43
SCARB2-204ENST00000509994 MOGSQ13724 837 aa12.38□□□□□ -0.43
SCARB2-204ENST00000509994 ERC1Q8IUD2 1116 aa12.38□□□□□ -0.43
SCARB2-204ENST00000509994 AS3MTQ9HBK9 375 aa12.38□□□□□ -0.43
SCARB2-204ENST00000509994 HERC5Q9UII4 1024 aaKnown RBP12.38□□□□□ -0.43
SCARB2-204ENST00000509994 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
SCARB2-204ENST00000509994 COL2A1P02458 1487 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-204ENST00000509994 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
SCARB2-204ENST00000509994 ADGRA2Q96PE1 1338 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 BRCA2P51587 3418 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
SCARB2-204ENST00000509994 TBC1D12O60347 775 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 SLC34A2O95436 690 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 CYP2E1P05181 493 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-204ENST00000509994 HLA-DOAP06340 250 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 CYP7A1P22680 504 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 GRK4P32298 578 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 USP5P45974 858 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 HMGCS2P54868 508 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 UBXN2AP68543 259 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 PRKCZQ05513 592 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 SPP2Q13103 211 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCARB2-204ENST00000509994 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 ANKRD13CQ8N6S4 541 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
SCARB2-204ENST00000509994 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
SCARB2-204ENST00000509994 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 AGTPBP1Q9UPW5 1226 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 FLT1P17948 1338 aa12.37□□□□□ -0.43
SCARB2-204ENST00000509994 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 CTGFP29279 349 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-204ENST00000509994 CAP2P40123 477 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-204ENST00000509994 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 ADGRA1Q86SQ6 560 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 ZNF280CQ8ND82 737 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
SCARB2-204ENST00000509994 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 NAV1Q8NEY1 1877 aa12.36□□□□□ -0.43
SCARB2-204ENST00000509994 HMMRO75330 724 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 GDF11O95390 407 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 BCRP11274 1271 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
SCARB2-204ENST00000509994 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-204ENST00000509994 MAP3K12Q12852 859 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 MTMR2Q13614 643 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 MTFR1Q15390 333 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-204ENST00000509994 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 COA7Q96BR5 231 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-204ENST00000509994 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
SCARB2-204ENST00000509994 DOCK3Q8IZD9 2030 aa12.34□□□□□ -0.43
SCARB2-204ENST00000509994 ASNSP08243 561 aa12.34□□□□□ -0.43
SCARB2-204ENST00000509994 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
SCARB2-204ENST00000509994 CCL5P13501 91 aa12.34□□□□□ -0.43
SCARB2-204ENST00000509994 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-204ENST00000509994 DNAJC2Q99543 621 aaKnown RBP12.34□□□□□ -0.43
SCARB2-204ENST00000509994 GABRQQ9UN88 632 aa12.34□□□□□ -0.43
SCARB2-204ENST00000509994 COG6Q9Y2V7 657 aa12.34□□□□□ -0.43
SCARB2-204ENST00000509994 MYH8P13535 1937 aa12.34□□□□□ -0.43
SCARB2-204ENST00000509994 ADCY3O60266 1144 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms