RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 HMMRO75330 724 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 GJA5P36382 358 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 MAP2K5Q13163 448 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 HDAC1Q13547 482 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 RASA3Q14644 834 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 TTC39AQ5SRH9 613 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 NBPF12Q5TAG4 269 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 HHIPL2Q6UWX4 724 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 RASAL3Q86YV0 1011 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 ERC1Q8IUD2 1116 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 APOBEC3FQ8IUX4 373 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 TEKT1Q969V4 418 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 DCPSQ96C86 337 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 FAM117AQ9C073 453 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 DEFB129Q9H1M3 183 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 VEZTQ9HBM0 779 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 HDAC9Q9UKV0 1011 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 SUGT1Q9Y2Z0 365 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 PHIPQ8WWQ0 1821 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 TCRBV5S4A2TA0A5A2 114 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 IRF6O14896 467 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 RAB11FIP3O75154 756 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 FRAT2O75474 233 aaPredicted RBP8.83□□□□□ -1
TOPBP1-207ENST00000509162 LDHBP07195 334 aaKnown RBP8.83□□□□□ -1
TOPBP1-207ENST00000509162 UQCRFS1P1P0C7P4 283 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 OSBPP22059 807 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 BTDP43251 543 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 PI4K2BQ8TCG2 481 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 CLMNQ96JQ2 1002 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 GBA2Q9HCG7 927 aaPredicted RBP8.83□□□□□ -1
TOPBP1-207ENST00000509162 ABCF2Q9UG63 623 aa8.83□□□□□ -1
TOPBP1-207ENST00000509162 COL2A1P02458 1487 aaPredicted RBP8.83□□□□□ -1
TOPBP1-207ENST00000509162 MAST3O60307 1309 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 GPR75-ASB3A0A0A6YYF3 556 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 UBE2Q2LH0YL09 131 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 SMIM22K7EJ46 135 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 SLC10A3P09131 477 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 MMP14P50281 582 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 RBM5P52756 815 aaKnown RBP eCLIP8.82□□□□□ -1
TOPBP1-207ENST00000509162 HUNKP57058 714 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 DYNLL1P63167 89 aaKnown RBP8.82□□□□□ -1
TOPBP1-207ENST00000509162 PRKG1Q13976 671 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 SMC5Q8IY18 1101 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 SH3RF3Q8TEJ3 882 aaPredicted RBP8.82□□□□□ -1
TOPBP1-207ENST00000509162 CAPNS2Q96L46 248 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 MRIQ9BWK5 157 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 LRRCC1Q9C099 1032 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 GNL3LQ9NVN8 582 aaKnown RBP8.82□□□□□ -1
TOPBP1-207ENST00000509162 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
TOPBP1-207ENST00000509162 DOCK1Q14185 1865 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 DDTLA6NHG4 134 aaPredicted RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 ATP5JP18859 108 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 RRP1BQ14684 758 aaKnown RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 MAP3K11Q16584 847 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 SHROOM1Q2M3G4 852 aaPredicted RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 HSP90AB4PQ58FF6 505 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 LDLRAD1Q5T700 205 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 SKAP1Q86WV1 359 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 DZIP1Q86YF9 867 aaKnown RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.81□□□□□ -1
TOPBP1-207ENST00000509162 CCDC102AQ96A19 550 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 DNAJC2Q99543 621 aaKnown RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 RIOK1Q9BRS2 568 aaKnown RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 BCL11AQ9H165 835 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 BOLA2Q9H3K6 86 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 DNAJC18Q9H819 358 aa8.81□□□□□ -1
TOPBP1-207ENST00000509162 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 ABT1Q9ULW3 272 aaKnown RBP8.81□□□□□ -1
TOPBP1-207ENST00000509162 WDR33Q9C0J8 1336 aaKnown RBP8.8□□□□□ -1
TOPBP1-207ENST00000509162 ATAD5Q96QE3 1844 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 FAM196BA6NMK8 535 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 GOLIM4O00461 696 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 USP2O75604 605 aaPredicted RBP8.8□□□□□ -1
TOPBP1-207ENST00000509162 PDE6AP16499 860 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 RGS3P49796 1198 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 TCP10Q12799 353 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 CCDC158Q5M9N0 1113 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 GORABQ5T7V8 394 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.8□□□□□ -1
TOPBP1-207ENST00000509162 CLASRPQ8N2M8 674 aaKnown RBP8.8□□□□□ -1
TOPBP1-207ENST00000509162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.8□□□□□ -1
TOPBP1-207ENST00000509162 HAUS7Q99871 368 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 IDI2Q9BXS1 227 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 RAI14Q9P0K7 980 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 HCSTQ9UBK5 93 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 PCDHGA10Q9Y5H3 936 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 PPP2R3BQ9Y5P8 575 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 PTPRFP10586 1907 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 FLT1P17948 1338 aa8.8□□□□□ -1
TOPBP1-207ENST00000509162 FOXP2O15409 715 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 IFIT2P09913 472 aaKnown RBP8.79□□□□□ -1
TOPBP1-207ENST00000509162 HSPA1AP0DMV8 641 aaKnown RBP8.79□□□□□ -1
TOPBP1-207ENST00000509162 HSPA1BP0DMV9 641 aaKnown RBP8.79□□□□□ -1
TOPBP1-207ENST00000509162 JAG1P78504 1218 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 FKBP1CQ5VVH2 108 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 FAM83AQ86UY5 434 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 PARP9Q8IXQ6 854 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms