RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 ZKSCAN2Q63HK3 967 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 LYSMD3Q7Z3D4 306 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 NKD1Q969G9 470 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 RWDD1Q9H446 243 aaPredicted RBP9.85□□□□□ -0.83
CCDC149-206ENST00000508236 SALL4Q9UJQ4 1053 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 MON2Q7Z3U7 1717 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 SASH3O75995 380 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 LMNB2Q03252 620 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 CAMK2GQ13555 558 aaPredicted RBP9.84□□□□□ -0.83
CCDC149-206ENST00000508236 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 GOLM1Q8NBJ4 401 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 OR13H1Q8NG92 308 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 RNF217Q8TC41 542 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 TCF12Q99081 682 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 CEP44Q9C0F1 390 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 ZFYVE1Q9HBF4 777 aa9.84□□□□□ -0.83
CCDC149-206ENST00000508236 FAM135BQ49AJ0 1406 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 EDC4Q6P2E9 1401 aaKnown RBP9.83□□□□□ -0.84
CCDC149-206ENST00000508236 CCDC85CA6NKD9 419 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 DNAJC6O75061 913 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 UPP2O95045 317 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 CELA3AP09093 270 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 SHDQ96IW2 340 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 MAP7D2Q96T17 732 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 ZCCHC2Q9C0B9 1178 aaKnown RBP9.83□□□□□ -0.84
CCDC149-206ENST00000508236 SPC25Q9HBM1 224 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 PCDH12Q9NPG4 1184 aa9.83□□□□□ -0.84
CCDC149-206ENST00000508236 TECPR2O15040 1411 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
CCDC149-206ENST00000508236 CPS1P31327 1500 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 SMAD7O15105 426 aaKnown RBP9.82□□□□□ -0.84
CCDC149-206ENST00000508236 RIPK4P57078 832 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 EXOSC9Q06265 439 aaKnown RBP9.82□□□□□ -0.84
CCDC149-206ENST00000508236 MVPQ14764 893 aaKnown RBP9.82□□□□□ -0.84
CCDC149-206ENST00000508236 TNNI3KQ59H18 835 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 SLITRK4Q8IW52 837 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 DZIP1LQ8IYY4 767 aaKnown RBP9.82□□□□□ -0.84
CCDC149-206ENST00000508236 CYP4X1Q8N118 509 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 UBR1Q8IWV7 1749 aa9.82□□□□□ -0.84
CCDC149-206ENST00000508236 PPP1R12AO14974 1030 aaPredicted RBP9.81□□□□□ -0.84
CCDC149-206ENST00000508236 MMP20O60882 483 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CDC45O75419 566 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 RHOQP17081 205 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CRKP46108 304 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 GRIN2CQ14957 1233 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CCDC81Q6ZN84 652 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 WAPLQ7Z5K2 1190 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CCNJLQ8IV13 435 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 SH3TC2Q8TF17 1288 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CCDC113Q9H0I3 377 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 SLKQ9H2G2 1235 aaPredicted RBP9.81□□□□□ -0.84
CCDC149-206ENST00000508236 PDCL3Q9H2J4 239 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CRISPLD1Q9H336 500 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 PRKAB1Q9Y478 270 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 LRRC7Q96NW7 1537 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 PPIP5K1Q6PFW1 1433 aa9.81□□□□□ -0.84
CCDC149-206ENST00000508236 CDK12Q9NYV4 1490 aaPredicted RBP9.8□□□□□ -0.84
CCDC149-206ENST00000508236 AATKQ6ZMQ8 1374 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 TNRQ92752 1358 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 IPO8O15397 1037 aaKnown RBP9.8□□□□□ -0.84
CCDC149-206ENST00000508236 TPM2P07951 284 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 SMPD1P17405 629 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 TARSP26639 723 aaKnown RBP9.8□□□□□ -0.84
CCDC149-206ENST00000508236 KCNQ4P56696 695 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 MLECQ14165 292 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 ALDH1L2Q3SY69 923 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 SAMD5Q5TGI4 173 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 TTBK2Q6IQ55 1244 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 FTSJ3Q8IY81 847 aaKnown RBP9.8□□□□□ -0.84
CCDC149-206ENST00000508236 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 SMC4Q9NTJ3 1288 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 FANCLQ9NW38 375 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 POLKQ9UBT6 870 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 PPT2Q9UMR5 302 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 KCNH4Q9UQ05 1017 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 MSRB2Q9Y3D2 182 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 C3P01024 1663 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 DLG5Q8TDM6 1919 aa9.8□□□□□ -0.84
CCDC149-206ENST00000508236 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
CCDC149-206ENST00000508236 CCINQ13939 588 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 SEZ6Q53EL9 994 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 L1TD1Q5T7N2 865 aaKnown RBP9.79□□□□□ -0.84
CCDC149-206ENST00000508236 NLRP8Q86W28 1048 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC149-206ENST00000508236 CELF2-AS1Q8N7Q2 184 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
CCDC149-206ENST00000508236 DNAJC7Q99615 494 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 OSMRQ99650 979 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 KANSL2Q9H9L4 492 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 KLHL42Q9P2K6 505 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 DDX19BQ9UMR2 479 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 TNNQ9UQP3 1299 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 KIF16BQ96L93 1317 aa9.79□□□□□ -0.84
CCDC149-206ENST00000508236 METP08581 1390 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms