RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
NR1I3-224ENST00000507215 SLC30A3Q99726 388 aa9.16□□□□□ -0.94
NR1I3-224ENST00000507215 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
NR1I3-224ENST00000507215 STIM2Q9P246 746 aa9.16□□□□□ -0.94
NR1I3-224ENST00000507215 DLEC1Q9Y238 1755 aa9.16□□□□□ -0.94
NR1I3-224ENST00000507215 BRD1O95696 1058 aa9.15□□□□□ -0.94
NR1I3-224ENST00000507215 BRD2P25440 801 aaKnown RBP9.15□□□□□ -0.94
NR1I3-224ENST00000507215 ARID4AP29374 1257 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-224ENST00000507215 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
NR1I3-224ENST00000507215 DDR1Q08345 913 aa9.15□□□□□ -0.94
NR1I3-224ENST00000507215 EIF4A2Q14240 407 aaKnown RBP9.15□□□□□ -0.94
NR1I3-224ENST00000507215 HIF1AQ16665 826 aa9.15□□□□□ -0.94
NR1I3-224ENST00000507215 ZNF530Q6P9A1 599 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-224ENST00000507215 POLKQ9UBT6 870 aa9.15□□□□□ -0.94
NR1I3-224ENST00000507215 KLF15Q9UIH9 416 aa9.15□□□□□ -0.94
NR1I3-224ENST00000507215 IQCA1LA6NCM1 817 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 H0YIN7 160 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 ABL1P00519 1130 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 CHRNA5P30532 468 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 LAMC2Q13753 1193 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 ECM1Q16610 540 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 SOGA3Q5TF21 947 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 NARFQ9UHQ1 456 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 TIAM2Q8IVF5 1701 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
NR1I3-224ENST00000507215 LTBP3Q9NS15 1303 aa9.13□□□□□ -0.95
NR1I3-224ENST00000507215 MPSTP25325 297 aa9.13□□□□□ -0.95
NR1I3-224ENST00000507215 CTCFP49711 727 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-224ENST00000507215 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
NR1I3-224ENST00000507215 ATCAYQ86WG3 371 aa9.13□□□□□ -0.95
NR1I3-224ENST00000507215 ACDQ96AP0 544 aa9.13□□□□□ -0.95
NR1I3-224ENST00000507215 KCNH4Q9UQ05 1017 aa9.13□□□□□ -0.95
NR1I3-224ENST00000507215 SOS1Q07889 1333 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-224ENST00000507215 TJP1Q07157 1748 aa9.12□□□□□ -0.95
NR1I3-224ENST00000507215 DICER1Q9UPY3 1922 aaKnown RBP9.12□□□□□ -0.95
NR1I3-224ENST00000507215 A0A087WZG4 1122 aa9.12□□□□□ -0.95
NR1I3-224ENST00000507215 BMP4P12644 408 aa9.12□□□□□ -0.95
NR1I3-224ENST00000507215 PDE6BP35913 854 aa9.12□□□□□ -0.95
NR1I3-224ENST00000507215 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
NR1I3-224ENST00000507215 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
NR1I3-224ENST00000507215 RAB44Q7Z6P3 723 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-224ENST00000507215 SRP68Q9UHB9 627 aaKnown RBP9.12□□□□□ -0.95
NR1I3-224ENST00000507215 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
NR1I3-224ENST00000507215 ADAMTS7Q9UKP4 1686 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 NPR3P17342 541 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 ARSDP51689 593 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 RASSF7Q02833 373 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 NFIXQ14938 502 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 USPL1Q5W0Q7 1092 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-224ENST00000507215 LDHDQ86WU2 507 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 C2CD5Q86YS7 1000 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 COL15A1P39059 1388 aa9.11□□□□□ -0.95
NR1I3-224ENST00000507215 AFDNP55196 1824 aaKnown RBP9.1□□□□□ -0.95
NR1I3-224ENST00000507215 SCN11AQ9UI33 1791 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 ICMTO60725 284 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 SERPINB2P05120 415 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 ZAP70P43403 619 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
NR1I3-224ENST00000507215 SPEM2Q0P670 501 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 AKAP4Q5JQC9 854 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 GSX2Q9BZM3 304 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 KCNMB2Q9Y691 235 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 CCDC88AQ3V6T2 1871 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 SCN4AP35499 1836 aa9.1□□□□□ -0.95
NR1I3-224ENST00000507215 NFKBIEO00221 500 aa9.09□□□□□ -0.95
NR1I3-224ENST00000507215 STARD3NLO95772 234 aa9.09□□□□□ -0.95
NR1I3-224ENST00000507215 EIF1AXP47813 144 aaKnown RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 PCBP4P57723 403 aaKnown RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 NPM2Q86SE8 214 aaKnown RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 TEX13AQ9BXU3 409 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 SLC52A2Q9HAB3 445 aa9.09□□□□□ -0.95
NR1I3-224ENST00000507215 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
NR1I3-224ENST00000507215 CARMIL3Q8ND23 1372 aa9.09□□□□□ -0.95
NR1I3-224ENST00000507215 MRC1P22897 1456 aa9.08□□□□□ -0.96
NR1I3-224ENST00000507215 FER1L6Q2WGJ9 1857 aa9.08□□□□□ -0.96
NR1I3-224ENST00000507215 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-224ENST00000507215 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-224ENST00000507215 PDIA4P13667 645 aaKnown RBP9.08□□□□□ -0.96
NR1I3-224ENST00000507215 MAP2K3P46734 347 aa9.08□□□□□ -0.96
NR1I3-224ENST00000507215 MAP2K1Q02750 393 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-224ENST00000507215 CMTR1Q8N1G2 835 aaKnown RBP9.08□□□□□ -0.96
NR1I3-224ENST00000507215 GPR152Q8TDT2 470 aa9.08□□□□□ -0.96
NR1I3-224ENST00000507215 OXCT2Q9BYC2 517 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-224ENST00000507215 EGFL7Q9UHF1 273 aa9.08□□□□□ -0.96
NR1I3-224ENST00000507215 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
NR1I3-224ENST00000507215 PASKQ96RG2 1323 aa9.07□□□□□ -0.96
NR1I3-224ENST00000507215 FOXN1O15353 648 aa9.07□□□□□ -0.96
NR1I3-224ENST00000507215 NOM1Q5C9Z4 860 aaKnown RBP9.07□□□□□ -0.96
NR1I3-224ENST00000507215 ZNF468Q5VIY5 522 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-224ENST00000507215 STYK1Q6J9G0 422 aa9.07□□□□□ -0.96
NR1I3-224ENST00000507215 PNMA8AQ86V59 439 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-224ENST00000507215 DNAJC10Q8IXB1 793 aa9.07□□□□□ -0.96
NR1I3-224ENST00000507215 ZFATQ9P243 1243 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms