RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TRPV1Q8NER1 839 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 LPAR1Q92633 364 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 HLA-CQ95604 372 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 PANK3Q9H999 370 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 OTOGLQ3ZCN5 2332 aa4.46□□□□□ -1.69
TCOF1-208ENST00000506063 ZZEF1O43149 2961 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 SNAP23O00161 211 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 PEX10O60683 326 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 LPXNO60711 386 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 IL1R1P14778 569 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 MYOGP15173 224 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 IL9P15248 144 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 PRKAR2BP31323 418 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 SKIV2LQ15477 1246 aaKnown RBP4.46□□□□□ -1.7
TCOF1-208ENST00000506063 GRIK5Q16478 980 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 TREML2Q5T2D2 321 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 MIGA2Q7L4E1 593 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 BMP8AQ7Z5Y6 402 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 ANKRD18AQ8IVF6 992 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.46□□□□□ -1.7
TCOF1-208ENST00000506063 RMDN1Q96DB5 314 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 CCDC85AQ96PX6 553 aaPredicted RBP4.46□□□□□ -1.7
TCOF1-208ENST00000506063 FLRT1Q9NZU1 646 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 DDX20Q9UHI6 824 aaKnown RBP4.46□□□□□ -1.7
TCOF1-208ENST00000506063 SERPINA10Q9UK55 444 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 JAG2Q9Y219 1238 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 AFG3L2Q9Y4W6 797 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 MYO7AQ13402 2215 aa4.46□□□□□ -1.7
TCOF1-208ENST00000506063 ZNF236Q9UL36 1845 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 SOWAHBA6NEL2 793 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 C19orf67A6NJJ6 358 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 PHF20L1A8MW92 1017 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 HTATSF1O43719 755 aaKnown RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 ARHGEF15O94989 841 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 SLC4A2P04920 1241 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 CLTBP09497 229 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 ZKSCAN1P17029 563 aaPredicted RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 DSG3P32926 999 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 FAAP100Q0VG06 881 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 AIMP1Q12904 312 aaKnown RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 RAB30Q15771 203 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 CCDC152Q4G0S7 254 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 MORN1Q5T089 497 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 GJC2Q5T442 439 aaPredicted RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 CCDC129Q6ZRS4 1044 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 C15orf52Q6ZUT6 534 aaKnown RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 FASTKD5Q7L8L6 764 aaKnown RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 FAM83AQ86UY5 434 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 SMCR8Q8TEV9 937 aaPredicted RBP4.45□□□□□ -1.7
TCOF1-208ENST00000506063 MFSD14AQ96MC6 490 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 ZNF341Q9BYN7 854 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 MORF4L1Q9UBU8 362 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 AGTPBP1Q9UPW5 1226 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 LEMD3Q9Y2U8 911 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 TACC3Q9Y6A5 838 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 FRYQ5TBA9 3013 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 UTYO14607 1347 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 SCN5AQ14524 2016 aa4.45□□□□□ -1.7
TCOF1-208ENST00000506063 ZNFX1Q9P2E3 1918 aaKnown RBP4.44□□□□□ -1.7
TCOF1-208ENST00000506063 LOC400499M0QZD8 3231 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 RAG1P15918 1043 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 PTPRAP18433 802 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 CRKP46108 304 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 TNNI2P48788 182 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 RBM5P52756 815 aaKnown RBP eCLIP4.44□□□□□ -1.7
TCOF1-208ENST00000506063 RABGGTBP53611 331 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 ZP2Q05996 745 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 LEXMQ3ZCV2 418 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 FKBP1CQ5VVH2 108 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 SAMD1Q6SPF0 538 aaPredicted RBP4.44□□□□□ -1.7
TCOF1-208ENST00000506063 GADL1Q6ZQY3 521 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 ZNF365Q70YC5 407 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 TET1Q8NFU7 2136 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 PLBD2Q8NHP8 589 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 SOCS4Q8WXH5 440 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 JARID2Q92833 1246 aaPredicted RBP4.44□□□□□ -1.7
TCOF1-208ENST00000506063 VWCEQ96DN2 955 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 NUDT12Q9BQG2 462 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 SLC28A3Q9HAS3 691 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 TXNRD2Q9NNW7 524 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.44□□□□□ -1.7
TCOF1-208ENST00000506063 DACH1Q9UI36 760 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 MSRAQ9UJ68 235 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 TBX21Q9UL17 535 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 TTF2Q9UNY4 1162 aaKnown RBP4.44□□□□□ -1.7
TCOF1-208ENST00000506063 TRPC6Q9Y210 931 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 SIP14410 1827 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 ZNF521Q96K83 1311 aa4.44□□□□□ -1.7
TCOF1-208ENST00000506063 GCN1Q92616 2671 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 GRXCR2A6NFK2 248 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 CYSRT1A8MQ03 144 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 U2SURPO15042 1029 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 PDE8AO60658 829 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 TIMP1P01033 207 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 SLURP2P0DP57 97 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 CYBAP13498 195 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 SLC5A1P13866 664 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 CSF2RAP15509 400 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 EIF2S2P20042 333 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms