RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 EHD4Q9H223 541 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
VCAN-205ENST00000503923 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
VCAN-205ENST00000503923 ZNF112Q9UJU3 913 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 CCDC171Q6TFL3 1326 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 BAZ2AQ9UIF9 1905 aaKnown RBP13.33□□□□□ -0.28
VCAN-205ENST00000503923 SIPA1L1O43166 1804 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 CHMLP26374 656 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 ECE1P42892 770 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 TDO2P48775 406 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 ZNF157P51786 506 aaPredicted RBP13.32□□□□□ -0.28
VCAN-205ENST00000503923 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 ZNF589Q86UQ0 364 aaPredicted RBP13.32□□□□□ -0.28
VCAN-205ENST00000503923 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 CSADQ9Y600 493 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 RAD50Q92878 1312 aa13.32□□□□□ -0.28
VCAN-205ENST00000503923 PHF20L1A8MW92 1017 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 USP17L21D6R901 530 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 SLURP2P0DP57 97 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 PLCD1P51178 756 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 VGLL4Q14135 290 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 SBK1Q52WX2 424 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 C12orf60Q5U649 245 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 CYP4F22Q6NT55 531 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.31□□□□□ -0.28
VCAN-205ENST00000503923 IFNL3Q8IZI9 196 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 SLC10A4Q96EP9 437 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 NAPBQ9H115 298 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 EPB41L4AQ9HCS5 686 aaPredicted RBP13.31□□□□□ -0.28
VCAN-205ENST00000503923 TAOK2Q9UL54 1235 aa13.31□□□□□ -0.28
VCAN-205ENST00000503923 FAM196BA6NMK8 535 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 SLC10A3P09131 477 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 CYP2D6P10635 497 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 INPP5BP32019 993 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 NOL9Q5SY16 702 aaKnown RBP13.3□□□□□ -0.28
VCAN-205ENST00000503923 VPS53Q5VIR6 699 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 RASAL3Q86YV0 1011 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 ZKSCAN4Q969J2 545 aaPredicted RBP13.3□□□□□ -0.28
VCAN-205ENST00000503923 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 CAPNS2Q96L46 248 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
VCAN-205ENST00000503923 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
VCAN-205ENST00000503923 FOXP2O15409 715 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
VCAN-205ENST00000503923 HSPD1P10809 573 aaKnown RBP13.29□□□□□ -0.28
VCAN-205ENST00000503923 VEGFBP49765 207 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 GABPAQ06546 454 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 GRM1Q13255 1194 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 ALX1Q15699 326 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 SCYL3Q8IZE3 742 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 DNAJC5GQ8N7S2 189 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 ELP3Q9H9T3 547 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
VCAN-205ENST00000503923 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
VCAN-205ENST00000503923 LAMB1P07942 1786 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 CYP2D7A0A087X1C5 515 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 MINDY4BA8MYZ0 360 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
VCAN-205ENST00000503923 CDC45O75419 566 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 CAP2P40123 477 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 EVX2Q03828 476 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 NOGQ13253 232 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 WNK4Q96J92 1243 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 ZMYM6O95789 1325 aa13.28□□□□□ -0.28
VCAN-205ENST00000503923 DOCK1Q14185 1865 aa13.27□□□□□ -0.28
VCAN-205ENST00000503923 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 SGSM2O43147 1006 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 FGAP02671 866 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
VCAN-205ENST00000503923 ZBTB48P10074 688 aaPredicted RBP13.27□□□□□ -0.29
VCAN-205ENST00000503923 SHMT1P34896 483 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 SPRYD7Q5W111 196 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 C16orf86Q6ZW13 317 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 ERO1BQ86YB8 467 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 DSCC1Q9BVC3 393 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 IL25Q9H293 177 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 GINM1Q9NU53 330 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 ROBO3Q96MS0 1386 aa13.27□□□□□ -0.29
VCAN-205ENST00000503923 ASNSP08243 561 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 MYH8P13535 1937 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 MAP2K2P36507 400 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 CDK8P49336 464 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 PPATQ06203 517 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 PPARAQ07869 468 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
VCAN-205ENST00000503923 CERKLQ49MI3 558 aaPredicted RBP13.26□□□□□ -0.29
VCAN-205ENST00000503923 SLC44A5Q8NCS7 719 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 ATAD5Q96QE3 1844 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 ESYT1Q9BSJ8 1104 aa13.26□□□□□ -0.29
VCAN-205ENST00000503923 ZNF287Q9HBT7 754 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms