RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	RASAL3	Q86YV0	1011 aa		13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	XAGE2	Q96GT9	111 aa		13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	DDX19B	Q9UMR2	479 aa		13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	ATP8B2	P98198	1209 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	KCNC4	Q03721	635 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	GRIK5	Q16478	980 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	TTC39A	Q5SRH9	613 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	SLF2	Q8IX21	1173 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	BCL11A	Q9H165	835 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	COG6	Q9Y2V7	657 aa		13.1	□□□□□ -0.31
CDK11A-222	ENST00000498810	CASP8AP2	Q9UKL3	1982 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	ZBTB7B	O15156	539 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	HMMR	O75330	724 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	RGS20	O76081	388 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	HSPA8	P11142	646 aa	Known RBP	13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	PRDX5	P30044	214 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	CACNB3	P54284	484 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	KIF23	Q02241	960 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	RASGRF1	Q13972	1273 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	CCDC158	Q5M9N0	1113 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	HOOK2	Q96ED9	719 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	ZDHHC15	Q96MV8	337 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	PRDM10	Q9NQV6	1147 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	AOX1	Q06278	1338 aa		13.09	□□□□□ -0.31
CDK11A-222	ENST00000498810	SSC5D	A1L4H1	1573 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	UQCRFS1P1	P0C7P4	283 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	DIXDC1	Q155Q3	683 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	CEP85	Q6P2H3	762 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	HHIPL2	Q6UWX4	724 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	ERICH6	Q7L0X2	663 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	ERC1	Q8IUD2	1116 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	SSH3	Q8TE77	659 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	NOL10	Q9BSC4	688 aa	Known RBP	13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	TMEM39B	Q9GZU3	492 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	FZD1	Q9UP38	647 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	SALL1	Q9NSC2	1324 aa		13.08	□□□□□ -0.32
CDK11A-222	ENST00000498810	FAM155A	B1AL88	458 aa	Predicted RBP	13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	APBB1	O00213	710 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	SREBF2	Q12772	1141 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	HSP90AB4P	Q58FF6	505 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	TNNI3K	Q59H18	835 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	TJAP1	Q5JTD0	557 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	SLC10A4	Q96EP9	437 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	RAI14	Q9P0K7	980 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	DAGLA	Q9Y4D2	1042 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	FPGT-TNNI3K	V9GXZ4	949 aa		13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	PDS5A	Q29RF7	1337 aa	Known RBP	13.07	□□□□□ -0.32
CDK11A-222	ENST00000498810	HIC1	Q14526	733 aa		13.06	□□□□□ -0.32
CDK11A-222	ENST00000498810	ANKRD13A	Q8IZ07	590 aa		13.06	□□□□□ -0.32
CDK11A-222	ENST00000498810	SPATA5	Q8NB90	893 aa		13.06	□□□□□ -0.32
CDK11A-222	ENST00000498810	ZIC5	Q96T25	663 aa		13.06	□□□□□ -0.32
CDK11A-222	ENST00000498810	EXOC6B	Q9Y2D4	811 aa		13.06	□□□□□ -0.32
CDK11A-222	ENST00000498810	CSAD	Q9Y600	493 aa		13.06	□□□□□ -0.32
CDK11A-222	ENST00000498810	LAMB1	P07942	1786 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	GPR37	O15354	613 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	RNF40	O75150	1001 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	TRPA1	O75762	1119 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	DNAJB2	P25686	324 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	GSTO1	P78417	241 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	TCP10	Q12799	353 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	DCAF15	Q66K64	600 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	MRI	Q9BWK5	157 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	GPR108	Q9NPR9	543 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	USP40	Q9NVE5	1235 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	SAGE1	Q9NXZ1	904 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	LRP2BP	Q9P2M1	347 aa		13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.05	□□□□□ -0.32
CDK11A-222	ENST00000498810	ARID4A	P29374	1257 aa	Predicted RBP	13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	PI16	Q6UXB8	463 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	FAM83A	Q86UY5	434 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	AACS	Q86V21	672 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	DBNDD2	Q9BQY9	259 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	TMEM134	Q9H6X4	195 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	ELP3	Q9H9T3	547 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	HMG20B	Q9P0W2	317 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	MROH7-TTC4	A0A0A0MT08	1334 aa		13.04	□□□□□ -0.32
CDK11A-222	ENST00000498810	LDHC	P07864	332 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	MCAM	P43121	646 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	BTD	P43251	543 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	PICALM	Q13492	652 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	FKBP1C	Q5VVH2	108 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	CDC42EP5	Q6NZY7	148 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	WNK4	Q96J92	1243 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	CLMN	Q96JQ2	1002 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	WRNIP1	Q96S55	665 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	CSRNP1	Q96S65	589 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	SNRK	Q9NRH2	765 aa		13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.03	□□□□□ -0.32
CDK11A-222	ENST00000498810	CDK5RAP2	Q96SN8	1893 aa		13.02	□□□□□ -0.32
CDK11A-222	ENST00000498810	RCCD1	A6NED2	376 aa		13.02	□□□□□ -0.33
CDK11A-222	ENST00000498810	MANSC4	A6NHS7	340 aa	Predicted RBP	13.02	□□□□□ -0.33
CDK11A-222	ENST00000498810	UNCX	A6NJT0	531 aa		13.02	□□□□□ -0.33

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