RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
HMGCL-207ENST00000498698 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
HMGCL-207ENST00000498698 HERC5Q9UII4 1024 aaKnown RBP11.55□□□□□ -0.56
HMGCL-207ENST00000498698 FLT1P17948 1338 aa11.55□□□□□ -0.56
HMGCL-207ENST00000498698 CYP2C8P10632 490 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 CAP2P40123 477 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 MAP3K12Q12852 859 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-207ENST00000498698 MAGEB6Q8N7X4 407 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 ARMC5Q96C12 935 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 PALD1Q9ULE6 856 aa11.54□□□□□ -0.56
HMGCL-207ENST00000498698 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 IFIT2P09913 472 aaKnown RBP11.53□□□□□ -0.56
HMGCL-207ENST00000498698 BCRP11274 1271 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 CTGFP29279 349 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 JAG1P78504 1218 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 KIF22Q14807 665 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGCL-207ENST00000498698 PARK7Q99497 189 aaKnown RBP11.53□□□□□ -0.56
HMGCL-207ENST00000498698 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 PTCH2Q9Y6C5 1203 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 LAMB1P07942 1786 aa11.53□□□□□ -0.56
HMGCL-207ENST00000498698 USP17L5A8MUK1 530 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 GNRH1P01148 92 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 SPP2Q13103 211 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 TTF1Q15361 905 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-207ENST00000498698 GADL1Q6ZQY3 521 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 ZNF280CQ8ND82 737 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
HMGCL-207ENST00000498698 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 SAP30BPQ9UHR5 308 aaKnown RBP11.52□□□□□ -0.57
HMGCL-207ENST00000498698 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.57
HMGCL-207ENST00000498698 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 GOLIM4O00461 696 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 PDE6AP16499 860 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 ATP5JP18859 108 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 PSMC4P43686 418 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 SH3D19Q5HYK7 790 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
HMGCL-207ENST00000498698 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
HMGCL-207ENST00000498698 TCRBV5S4A2TA0A5A2 114 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 ASNSP08243 561 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 USP5P45974 858 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 PRMT2P55345 433 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 SHROOM1Q2M3G4 852 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-207ENST00000498698 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 CRACR2BQ8N4Y2 399 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-207ENST00000498698 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-207ENST00000498698 DNAJC2Q99543 621 aaKnown RBP11.5□□□□□ -0.57
HMGCL-207ENST00000498698 LRRCC1Q9C099 1032 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 BOLA2Q9H3K6 86 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 GINM1Q9NU53 330 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 SRRDQ9UH36 339 aa11.5□□□□□ -0.57
HMGCL-207ENST00000498698 MAGEB6P1A0A0J9YX57 407 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-207ENST00000498698 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-207ENST00000498698 OSBPP22059 807 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 HMGCS2P54868 508 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 SLC4A8Q2Y0W8 1093 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 HAUS7Q99871 368 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 EHD4Q9H223 541 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 HTTP42858 3142 aa11.49□□□□□ -0.57
HMGCL-207ENST00000498698 SMARCA5O60264 1052 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-207ENST00000498698 GDF11O95390 407 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 HOXD10P28358 340 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 FCGRTP55899 365 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 BACE1P56817 501 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 SMCR8Q8TEV9 937 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-207ENST00000498698 SH3TC2Q8TF17 1288 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 DCTPP1Q9H773 170 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 SERPINB13Q9UIV8 391 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
HMGCL-207ENST00000498698 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 GH2P01242 217 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-207ENST00000498698 ADD2P35612 726 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 PLCD1P51178 756 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMGCL-207ENST00000498698 MTMR2Q13614 643 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 SLFNL1Q499Z3 407 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
HMGCL-207ENST00000498698 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms