RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.14■□□□□ 0.65
HDAC4-213ENST00000496347 PI4KBQ9UBF8 816 aa19.14■□□□□ 0.65
HDAC4-213ENST00000496347 PDE4DIPQ5VU43 2346 aa19.14■□□□□ 0.65
HDAC4-213ENST00000496347 TNRC18O15417 2968 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-213ENST00000496347 A0A0G2JLL6 359 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-213ENST00000496347 MOGSQ13724 837 aa19.13■□□□□ 0.65
HDAC4-213ENST00000496347 PRRT2Q7Z6L0 340 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-213ENST00000496347 MAGEB6Q8N7X4 407 aa19.13■□□□□ 0.65
HDAC4-213ENST00000496347 CD99L2Q8TCZ2 262 aa19.13■□□□□ 0.65
HDAC4-213ENST00000496347 TGFBRAP1Q8WUH2 860 aa19.13■□□□□ 0.65
HDAC4-213ENST00000496347 PARK7Q99497 189 aaKnown RBP19.13■□□□□ 0.65
HDAC4-213ENST00000496347 TBC1D2Q9BYX2 928 aa19.13■□□□□ 0.65
HDAC4-213ENST00000496347 ZHX2Q9Y6X8 837 aa19.13■□□□□ 0.65
HDAC4-213ENST00000496347 ADGRA2Q96PE1 1338 aa19.12■□□□□ 0.65
HDAC4-213ENST00000496347 PDHXO00330 501 aa19.12■□□□□ 0.65
HDAC4-213ENST00000496347 FASTKD5Q7L8L6 764 aaKnown RBP19.12■□□□□ 0.65
HDAC4-213ENST00000496347 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
HDAC4-213ENST00000496347 EFCC1Q9HA90 598 aa19.12■□□□□ 0.65
HDAC4-213ENST00000496347 AFG3L2Q9Y4W6 797 aa19.12■□□□□ 0.65
HDAC4-213ENST00000496347 NDUFB9Q9Y6M9 179 aa19.12■□□□□ 0.65
HDAC4-213ENST00000496347 ZSWIM8A7E2V4 1837 aa19.11■□□□□ 0.65
HDAC4-213ENST00000496347 FAM196BA6NMK8 535 aa19.11■□□□□ 0.65
HDAC4-213ENST00000496347 MAPKAPK5Q8IW41 473 aa19.11■□□□□ 0.65
HDAC4-213ENST00000496347 LRRCC1Q9C099 1032 aa19.11■□□□□ 0.65
HDAC4-213ENST00000496347 SLC45A1Q9Y2W3 748 aa19.11■□□□□ 0.65
HDAC4-213ENST00000496347 HLA-DOAP06340 250 aa19.1■□□□□ 0.65
HDAC4-213ENST00000496347 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
HDAC4-213ENST00000496347 METTL16Q86W50 562 aaKnown RBP19.1■□□□□ 0.65
HDAC4-213ENST00000496347 KIAA0100Q14667 2235 aaKnown RBP19.1■□□□□ 0.65
HDAC4-213ENST00000496347 MGAMO43451 1857 aa19.09■□□□□ 0.65
HDAC4-213ENST00000496347 CAP2P40123 477 aa19.09■□□□□ 0.65
HDAC4-213ENST00000496347 LACTBP83111 547 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-213ENST00000496347 MLLT1Q03111 559 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-213ENST00000496347 KIF22Q14807 665 aa19.09■□□□□ 0.65
HDAC4-213ENST00000496347 MIGA1Q8NAN2 632 aa19.09■□□□□ 0.65
HDAC4-213ENST00000496347 DNAJC2Q99543 621 aaKnown RBP19.09■□□□□ 0.65
HDAC4-213ENST00000496347 TRIM34Q9BYJ4 488 aa19.09■□□□□ 0.65
HDAC4-213ENST00000496347 PTPN22Q9Y2R2 807 aa19.09■□□□□ 0.65
HDAC4-213ENST00000496347 TRIM75PA6NK02 468 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 GOLIM4O00461 696 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 GNRH1P01148 92 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 PDE6AP16499 860 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 ATP5JP18859 108 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 RRP1P56182 461 aaKnown RBP19.08■□□□□ 0.64
HDAC4-213ENST00000496347 SOX10P56693 466 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 DYNLL1P63167 89 aaKnown RBP19.08■□□□□ 0.64
HDAC4-213ENST00000496347 GPAT2Q6NUI2 795 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 CRACR2BQ8N4Y2 399 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-213ENST00000496347 DNAJC18Q9H819 358 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 GINM1Q9NU53 330 aa19.08■□□□□ 0.64
HDAC4-213ENST00000496347 MKI67P46013 3256 aaKnown RBP19.07■□□□□ 0.64
HDAC4-213ENST00000496347 ASNSP08243 561 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 USP5P45974 858 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 CAP1Q01518 475 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 SLC9C2Q5TAH2 1124 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 C17orf99Q6UX52 265 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 FOXP4Q8IVH2 680 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-213ENST00000496347 PROCA1Q8NCQ7 364 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-213ENST00000496347 HAUS7Q99871 368 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 RIOK1Q9BRS2 568 aaKnown RBP19.07■□□□□ 0.64
HDAC4-213ENST00000496347 EHD4Q9H223 541 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 PAG1Q9NWQ8 432 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-213ENST00000496347 PALD1Q9ULE6 856 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 AGTPBP1Q9UPW5 1226 aa19.07■□□□□ 0.64
HDAC4-213ENST00000496347 MYH8P13535 1937 aa19.06■□□□□ 0.64
HDAC4-213ENST00000496347 GADL1Q6ZQY3 521 aa19.06■□□□□ 0.64
HDAC4-213ENST00000496347 ZNF280CQ8ND82 737 aa19.06■□□□□ 0.64
HDAC4-213ENST00000496347 ARMC5Q96C12 935 aa19.06■□□□□ 0.64
HDAC4-213ENST00000496347 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.06■□□□□ 0.64
HDAC4-213ENST00000496347 AS3MTQ9HBK9 375 aa19.06■□□□□ 0.64
HDAC4-213ENST00000496347 SAP30BPQ9UHR5 308 aaKnown RBP19.06■□□□□ 0.64
HDAC4-213ENST00000496347 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
HDAC4-213ENST00000496347 USP17L5A8MUK1 530 aa19.05■□□□□ 0.64
HDAC4-213ENST00000496347 CPA4Q9UI42 421 aa19.05■□□□□ 0.64
HDAC4-213ENST00000496347 PNMA3Q9UL41 463 aa19.05■□□□□ 0.64
HDAC4-213ENST00000496347 ZNF532Q9HCE3 1301 aa19.04■□□□□ 0.64
HDAC4-213ENST00000496347 TCRBV5S4A2TA0A5A2 114 aa19.04■□□□□ 0.64
HDAC4-213ENST00000496347 PRMT2P55345 433 aa19.04■□□□□ 0.64
HDAC4-213ENST00000496347 RRP1BQ14684 758 aaKnown RBP19.04■□□□□ 0.64
HDAC4-213ENST00000496347 CCDC84Q86UT8 332 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-213ENST00000496347 GPATCH3Q96I76 525 aa19.04■□□□□ 0.64
HDAC4-213ENST00000496347 CRNKL1Q9BZJ0 848 aaKnown RBP19.04■□□□□ 0.64
HDAC4-213ENST00000496347 DCTPP1Q9H773 170 aa19.04■□□□□ 0.64
HDAC4-213ENST00000496347 SERPINB13Q9UIV8 391 aa19.04■□□□□ 0.64
HDAC4-213ENST00000496347 CYP2C8P10632 490 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 BCRP11274 1271 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 SPP2Q13103 211 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 TTC6Q86TZ1 520 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 SMCR8Q8TEV9 937 aaPredicted RBP19.03■□□□□ 0.64
HDAC4-213ENST00000496347 WDR18Q9BV38 432 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 ARHGAP39Q9C0H5 1083 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 ZBTB21Q9ULJ3 1066 aa19.03■□□□□ 0.64
HDAC4-213ENST00000496347 PABPC4Q13310 644 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDAC4-213ENST00000496347 EDC3Q96F86 508 aaKnown RBP19.02■□□□□ 0.64
HDAC4-213ENST00000496347 ECHDC1Q9NTX5 307 aa19.02■□□□□ 0.64
HDAC4-213ENST00000496347 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.64
HDAC4-213ENST00000496347 BAZ2AQ9UIF9 1905 aaKnown RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms