RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-211ENST00000495666 PARK7Q99497 189 aaKnown RBP13.11□□□□□ -0.31
RFTN1-211ENST00000495666 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 BRCA2P51587 3418 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 FOCADQ5VW36 1801 aa13.11□□□□□ -0.31
RFTN1-211ENST00000495666 CYP7A1P22680 504 aa13.1□□□□□ -0.31
RFTN1-211ENST00000495666 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
RFTN1-211ENST00000495666 RAET1EQ8TD07 263 aa13.1□□□□□ -0.31
RFTN1-211ENST00000495666 EAF2Q96CJ1 260 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-211ENST00000495666 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
RFTN1-211ENST00000495666 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
RFTN1-211ENST00000495666 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
RFTN1-211ENST00000495666 CTNND1O60716 968 aaKnown RBP13.09□□□□□ -0.31
RFTN1-211ENST00000495666 BAG3O95817 575 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 OSBPP22059 807 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 HMGCS2P54868 508 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 MOGSQ13724 837 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
RFTN1-211ENST00000495666 TREML2Q5T2D2 321 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 MAGEB6Q8N7X4 407 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
RFTN1-211ENST00000495666 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
RFTN1-211ENST00000495666 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
RFTN1-211ENST00000495666 A0A0G2JLL6 359 aaPredicted RBP13.08□□□□□ -0.32
RFTN1-211ENST00000495666 CXCL11O14625 94 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 USP5P45974 858 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 PRKCZQ05513 592 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 SPP2Q13103 211 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 MTFR1Q15390 333 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
RFTN1-211ENST00000495666 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
RFTN1-211ENST00000495666 PRRT2Q7Z6L0 340 aaPredicted RBP13.08□□□□□ -0.32
RFTN1-211ENST00000495666 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 FLT1P17948 1338 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
RFTN1-211ENST00000495666 MKI67P46013 3256 aaKnown RBP13.07□□□□□ -0.32
RFTN1-211ENST00000495666 FCGRTP55899 365 aa13.07□□□□□ -0.32
RFTN1-211ENST00000495666 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
RFTN1-211ENST00000495666 ARMC5Q96C12 935 aa13.07□□□□□ -0.32
RFTN1-211ENST00000495666 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
RFTN1-211ENST00000495666 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
RFTN1-211ENST00000495666 GABRQQ9UN88 632 aa13.07□□□□□ -0.32
RFTN1-211ENST00000495666 ADGRA2Q96PE1 1338 aa13.07□□□□□ -0.32
RFTN1-211ENST00000495666 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
RFTN1-211ENST00000495666 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
RFTN1-211ENST00000495666 PEX10O60683 326 aa13.06□□□□□ -0.32
RFTN1-211ENST00000495666 ELNP15502 786 aa13.06□□□□□ -0.32
RFTN1-211ENST00000495666 MTMR2Q13614 643 aa13.06□□□□□ -0.32
RFTN1-211ENST00000495666 SRRDQ9UH36 339 aa13.06□□□□□ -0.32
RFTN1-211ENST00000495666 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 PLCG2P16885 1265 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 CAP2P40123 477 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 EDC3Q96F86 508 aaKnown RBP13.05□□□□□ -0.32
RFTN1-211ENST00000495666 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
RFTN1-211ENST00000495666 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
RFTN1-211ENST00000495666 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 GOLIM4O00461 696 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
RFTN1-211ENST00000495666 HOXD10P28358 340 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 GRK4P32298 578 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 JAG1P78504 1218 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 DNAJC18Q9H819 358 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
RFTN1-211ENST00000495666 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
RFTN1-211ENST00000495666 BCRP11274 1271 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 CCL5P13501 91 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
RFTN1-211ENST00000495666 MAP3K12Q12852 859 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 RAB3GAP1Q15042 981 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
RFTN1-211ENST00000495666 FEZ1Q99689 392 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 PAGR1Q9BTK6 254 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 RNF208Q9H0X6 261 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 MYH8P13535 1937 aa13.03□□□□□ -0.32
RFTN1-211ENST00000495666 COL2A1P02458 1487 aaPredicted RBP13.03□□□□□ -0.32
RFTN1-211ENST00000495666 BAZ2AQ9UIF9 1905 aaKnown RBP13.02□□□□□ -0.32
RFTN1-211ENST00000495666 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
RFTN1-211ENST00000495666 ADCY3O60266 1144 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 TBC1D12O60347 775 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 HMMRO75330 724 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 GH2P01242 217 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 MS4A1P11836 297 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 FLT3LGP49771 235 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms