RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SH3TC2Q8TF17 1288 aa8.95□□□□□ -0.98
SMC2-205ENST00000493955 BTBD6Q96KE9 485 aa8.95□□□□□ -0.98
SMC2-205ENST00000493955 SLC12A7Q9Y666 1083 aa8.95□□□□□ -0.98
SMC2-205ENST00000493955 DDAH1O94760 285 aa8.94□□□□□ -0.98
SMC2-205ENST00000493955 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
SMC2-205ENST00000493955 LRRC4BQ9NT99 713 aa8.94□□□□□ -0.98
SMC2-205ENST00000493955 PRAMEF27A3QJZ7 478 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 ADAM11O75078 769 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 SLFN14P0C7P3 912 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 NID1P14543 1247 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 AMPD1P23109 780 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 CD68P34810 354 aaPredicted RBP8.93□□□□□ -0.98
SMC2-205ENST00000493955 ZC3H12AQ5D1E8 599 aaKnown RBP8.93□□□□□ -0.98
SMC2-205ENST00000493955 TMEM201Q5SNT2 666 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 C6orf15Q6UXA7 325 aaPredicted RBP8.93□□□□□ -0.98
SMC2-205ENST00000493955 DMRTC2Q8IXT2 367 aaPredicted RBP8.93□□□□□ -0.98
SMC2-205ENST00000493955 DCAF11Q8TEB1 546 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 ADAM30Q9UKF2 790 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 PCDHGC5Q9Y5F6 944 aa8.93□□□□□ -0.98
SMC2-205ENST00000493955 SLC22A31A6NKX4 558 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 SHISA8B8ZZ34 492 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 FOXD4L6Q3SYB3 417 aaPredicted RBP8.92□□□□□ -0.98
SMC2-205ENST00000493955 MTERF2Q49AM1 385 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 FOXD4L3Q6VB84 417 aaPredicted RBP8.92□□□□□ -0.98
SMC2-205ENST00000493955 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 NLRC3Q7RTR2 1065 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 C12orf40Q86WS4 652 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 LILRB2Q8N423 598 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 ATG4CQ96DT6 458 aa8.92□□□□□ -0.98
SMC2-205ENST00000493955 B2RBV5 119 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 DDX3YO15523 660 aaKnown RBP8.91□□□□□ -0.98
SMC2-205ENST00000493955 DNAJA2O60884 412 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 AOC2O75106 756 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 CDC45O75419 566 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 PGRP06401 933 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 BCRP11274 1271 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 NME1P15531 152 aaKnown RBP8.91□□□□□ -0.98
SMC2-205ENST00000493955 GRK4P32298 578 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 COL9A3Q14050 684 aaPredicted RBP8.91□□□□□ -0.98
SMC2-205ENST00000493955 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 INTS3Q68E01 1043 aaKnown RBP8.91□□□□□ -0.98
SMC2-205ENST00000493955 FAM178BQ8IXR5 827 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 DTWD1Q8N5C7 304 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 KLHL3Q9UH77 587 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 ADAMTS8Q9UP79 889 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 CSADQ9Y600 493 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 SYNGAP1Q96PV0 1343 aa8.91□□□□□ -0.98
SMC2-205ENST00000493955 TNFRSF10CO14798 259 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 DEAF1O75398 565 aaPredicted RBP8.9□□□□□ -0.98
SMC2-205ENST00000493955 DLGAP3O95886 979 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 SLURP2P0DP57 97 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 ACRP10323 421 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 ETF1P62495 437 aaKnown RBP8.9□□□□□ -0.98
SMC2-205ENST00000493955 ERVK-24P63145 666 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 RING1Q06587 406 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 CDCP2Q5VXM1 449 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 CNNM2Q9H8M5 875 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 KANSL2Q9H9L4 492 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 FANCLQ9NW38 375 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 HIF3AQ9Y2N7 669 aa8.9□□□□□ -0.98
SMC2-205ENST00000493955 UPK3BL1B0FP48 263 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 RNF225M0QZC1 329 aaPredicted RBP8.89□□□□□ -0.99
SMC2-205ENST00000493955 ZYXQ15942 572 aaKnown RBP8.89□□□□□ -0.99
SMC2-205ENST00000493955 UNC5AQ6ZN44 842 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 ST13P5Q8NFI4 369 aaPredicted RBP8.89□□□□□ -0.99
SMC2-205ENST00000493955 APPBP2Q92624 585 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 WNT10AQ9GZT5 417 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 PHAXQ9H814 394 aaKnown RBP8.89□□□□□ -0.99
SMC2-205ENST00000493955 PICK1Q9NRD5 415 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 RAD18Q9NS91 495 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 KCNK4Q9NYG8 393 aa8.89□□□□□ -0.99
SMC2-205ENST00000493955 ID3Q02535 119 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 NCAPHQ15003 741 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 C2orf27AQ580R0 203 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 ARSHQ5FYA8 562 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 PPM1JQ5JR12 505 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 RNF187Q5TA31 235 aaPredicted RBP8.88□□□□□ -0.99
SMC2-205ENST00000493955 MRM1Q6IN84 353 aaKnown RBP8.88□□□□□ -0.99
SMC2-205ENST00000493955 HOMER1Q86YM7 354 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 ZNF669Q96BR6 464 aaPredicted RBP8.88□□□□□ -0.99
SMC2-205ENST00000493955 ACSF2Q96CM8 615 aaPredicted RBP8.88□□□□□ -0.99
SMC2-205ENST00000493955 ESYT3A0FGR9 886 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 DGKGP49619 791 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 EXOSC6Q5RKV6 272 aaKnown RBP8.88□□□□□ -0.99
SMC2-205ENST00000493955 ZBTB37Q5TC79 503 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 VHLLQ6RSH7 139 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 EEPD1Q7L9B9 569 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 UBASH3BQ8TF42 649 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 SLC9A7Q96T83 725 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 TMEM260Q9NX78 707 aa8.88□□□□□ -0.99
SMC2-205ENST00000493955 LTBP3Q9NS15 1303 aa8.87□□□□□ -0.99
SMC2-205ENST00000493955 FANCGO15287 622 aa8.87□□□□□ -0.99
SMC2-205ENST00000493955 TMPRSS2O15393 492 aa8.87□□□□□ -0.99
SMC2-205ENST00000493955 RAG1P15918 1043 aa8.87□□□□□ -0.99
SMC2-205ENST00000493955 DUOXA2Q1HG44 320 aa8.87□□□□□ -0.99
SMC2-205ENST00000493955 THAP3Q8WTV1 239 aaPredicted RBP8.87□□□□□ -0.99
SMC2-205ENST00000493955 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
SMC2-205ENST00000493955 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms