RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 METAP2P50579 478 aaKnown RBP eCLIP9.49□□□□□ -0.89
GBP3-208ENST00000493594 FXR1P51114 621 aaKnown RBP eCLIP9.49□□□□□ -0.89
GBP3-208ENST00000493594 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 LRRC24Q50LG9 513 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 TADA2BQ86TJ2 420 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 EFCAB13Q8IY85 973 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
GBP3-208ENST00000493594 MED4Q9NPJ6 270 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 KDM3BQ7LBC6 1761 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 FAM237AA0A1B0GTK4 181 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 CCT5P48643 541 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 TRIM29Q14134 588 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 MORC3Q14149 939 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 USP49Q70CQ1 688 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 ATG9AQ7Z3C6 839 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 GSPT2Q8IYD1 628 aaKnown RBP9.49□□□□□ -0.89
GBP3-208ENST00000493594 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
GBP3-208ENST00000493594 FBXL16Q8N461 479 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
GBP3-208ENST00000493594 SLF1Q9BQI6 1058 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 PUS7LQ9H0K6 701 aaKnown RBP9.49□□□□□ -0.89
GBP3-208ENST00000493594 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
GBP3-208ENST00000493594 HDAC6Q9UBN7 1215 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 TRIM10Q9UDY6 481 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 MYO6Q9UM54 1294 aa9.49□□□□□ -0.89
GBP3-208ENST00000493594 BTBD18B2RXH4 712 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 EXOC5O00471 708 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 SRGAP2O75044 1071 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 CCT6AP40227 531 aaKnown RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 AFMP43652 599 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 RABL6Q3YEC7 729 aaPredicted RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 MSL3Q8N5Y2 521 aaKnown RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 CCDC148Q8NFR7 591 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 EHD4Q9H223 541 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 HEG1Q9ULI3 1381 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 A0A087WUV0 522 aaPredicted RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 RNF225M0QZC1 329 aaPredicted RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 MFAP3LO75121 409 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 ERLIN2O94905 339 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 PRPF6O94906 941 aaKnown RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 GGCXP38435 758 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 IARSP41252 1262 aaKnown RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 ERVK-24P63145 666 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 WHAMMP3Q1A5X7 153 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 AMOTQ4VCS5 1084 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 TTC19Q6DKK2 380 aaPredicted RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 ZNF790Q6PG37 636 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 APTXQ7Z2E3 356 aaKnown RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 KAT2BQ92831 832 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 CAPZA3Q96KX2 299 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 NAA15Q9BXJ9 866 aaKnown RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 KCNJ14Q9UNX9 436 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 TFR2Q9UP52 801 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 MRC1P22897 1456 aa9.48□□□□□ -0.89
GBP3-208ENST00000493594 MED1Q15648 1581 aaPredicted RBP9.48□□□□□ -0.89
GBP3-208ENST00000493594 GYPCP04921 128 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 CD44P16070 742 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 SARSP49591 514 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 MNAT1P51948 309 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 FBXW10Q5XX13 1052 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 CYB5R4Q7L1T6 521 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 SLC26A6Q9BXS9 759 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 INCENPQ9NQS7 918 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 TTF2Q9UNY4 1162 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 PXDNQ92626 1479 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 SLIT1O75093 1534 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 TOB1P50616 345 aaPredicted RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 PLCD1P51178 756 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 TUBB4BP68371 445 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 TEX2Q8IWB9 1127 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 SECISBP2LQ93073 1101 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 MMS19Q96T76 1030 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 NUP88Q99567 741 aaPredicted RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 PUS3Q9BZE2 481 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 KAT14Q9H8E8 782 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 ADD3Q9UEY8 706 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 HPCAL4Q9UM19 191 aa9.47□□□□□ -0.89
GBP3-208ENST00000493594 ANGEL1Q9UNK9 670 aaKnown RBP9.47□□□□□ -0.89
GBP3-208ENST00000493594 ZMYM6O95789 1325 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.89
GBP3-208ENST00000493594 APPP05067 770 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 ARHGAP25P42331 645 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 STIM1Q13586 685 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 TUBB2AQ13885 445 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 MCTP2Q6DN12 878 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 WDR93Q6P2C0 686 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 CPLX2Q6PUV4 134 aaKnown RBP9.46□□□□□ -0.89
GBP3-208ENST00000493594 PI16Q6UXB8 463 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 STAMQ92783 540 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 TUBB2BQ9BVA1 445 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 VPS16Q9H269 839 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 WWC3Q9ULE0 1092 aa9.46□□□□□ -0.89
GBP3-208ENST00000493594 DIP2BQ9P265 1576 aa9.46□□□□□ -0.9
GBP3-208ENST00000493594 CDHR2Q9BYE9 1310 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms