RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TBC1D2Q9BYX2 928 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 IDH1O75874 414 aaKnown RBP14□□□□□ -0.17
LRTM1-202ENST00000493075 GNRH1P01148 92 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
LRTM1-202ENST00000493075 SLURP2P0DP57 97 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 CAP2P40123 477 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 KIF22Q14807 665 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 TGFBRAP1Q8WUH2 860 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 SLC45A1Q9Y2W3 748 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 MYH2Q9UKX2 1941 aa14□□□□□ -0.17
LRTM1-202ENST00000493075 SOX10P56693 466 aa13.99□□□□□ -0.17
LRTM1-202ENST00000493075 LACTBP83111 547 aaPredicted RBP13.99□□□□□ -0.17
LRTM1-202ENST00000493075 CAP1Q01518 475 aa13.99□□□□□ -0.17
LRTM1-202ENST00000493075 ANTXR1Q9H6X2 564 aa13.99□□□□□ -0.17
LRTM1-202ENST00000493075 FLT1P17948 1338 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 ADGRA2Q96PE1 1338 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 PRMT2P55345 433 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
LRTM1-202ENST00000493075 MAPKAPK5Q8IW41 473 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 MAGEB6Q8N7X4 407 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 ARMC5Q96C12 935 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
LRTM1-202ENST00000493075 GINM1Q9NU53 330 aa13.98□□□□□ -0.17
LRTM1-202ENST00000493075 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
LRTM1-202ENST00000493075 APBB1O00213 710 aa13.97□□□□□ -0.17
LRTM1-202ENST00000493075 RRP1BQ14684 758 aaKnown RBP13.97□□□□□ -0.17
LRTM1-202ENST00000493075 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
LRTM1-202ENST00000493075 CPA4Q9UI42 421 aa13.97□□□□□ -0.17
LRTM1-202ENST00000493075 NDUFB9Q9Y6M9 179 aa13.97□□□□□ -0.17
LRTM1-202ENST00000493075 USP17L5A8MUK1 530 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 BCRP11274 1271 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 ATP5JP18859 108 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 PROCA1Q8NCQ7 364 aaPredicted RBP13.96□□□□□ -0.17
LRTM1-202ENST00000493075 WDR18Q9BV38 432 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 PALD1Q9ULE6 856 aa13.96□□□□□ -0.17
LRTM1-202ENST00000493075 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 ASNSP08243 561 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 HOXD10P28358 340 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 SPP2Q13103 211 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 SLC9C2Q5TAH2 1124 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 GADL1Q6ZQY3 521 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 NBPF11Q86T75 865 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 CRACR2BQ8N4Y2 399 aaPredicted RBP13.95□□□□□ -0.18
LRTM1-202ENST00000493075 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
LRTM1-202ENST00000493075 TRIM34Q9BYJ4 488 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 LRRCC1Q9C099 1032 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 AS3MTQ9HBK9 375 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 AGTPBP1Q9UPW5 1226 aa13.95□□□□□ -0.18
LRTM1-202ENST00000493075 GOLIM4O00461 696 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 CYP2C8P10632 490 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 PDE6AP16499 860 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 PSMC4P43686 418 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 USP5P45974 858 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 TTC6Q86TZ1 520 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 ARHGAP39Q9C0H5 1083 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 EHD4Q9H223 541 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 DCTPP1Q9H773 170 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 DNAJC18Q9H819 358 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
LRTM1-202ENST00000493075 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
LRTM1-202ENST00000493075 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
LRTM1-202ENST00000493075 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
LRTM1-202ENST00000493075 CCDC84Q86UT8 332 aaPredicted RBP13.93□□□□□ -0.18
LRTM1-202ENST00000493075 DNAJC2Q99543 621 aaKnown RBP13.93□□□□□ -0.18
LRTM1-202ENST00000493075 HAUS7Q99871 368 aa13.93□□□□□ -0.18
LRTM1-202ENST00000493075 PAG1Q9NWQ8 432 aa13.93□□□□□ -0.18
LRTM1-202ENST00000493075 SRRDQ9UH36 339 aa13.93□□□□□ -0.18
LRTM1-202ENST00000493075 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
LRTM1-202ENST00000493075 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
LRTM1-202ENST00000493075 TCRBV5S4A2TA0A5A2 114 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 C19orf81C9J6K1 198 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 FMNL1O95466 1100 aaPredicted RBP13.92□□□□□ -0.18
LRTM1-202ENST00000493075 CTGFP29279 349 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 BACE1P56817 501 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 TATDN1Q6P1N9 297 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 TRIM47Q96LD4 638 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 CRNKL1Q9BZJ0 848 aaKnown RBP13.92□□□□□ -0.18
LRTM1-202ENST00000493075 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 SERPINB13Q9UIV8 391 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 DOCK2Q92608 1830 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 AK9Q5TCS8 1911 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 ZNF532Q9HCE3 1301 aa13.92□□□□□ -0.18
LRTM1-202ENST00000493075 OSBPP22059 807 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 FCGRTP55899 365 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 JAG1P78504 1218 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 TREML2Q5T2D2 321 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
LRTM1-202ENST00000493075 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
LRTM1-202ENST00000493075 TAOK2Q9UL54 1235 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
LRTM1-202ENST00000493075 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
LRTM1-202ENST00000493075 HOXA7P31268 230 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms