RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 CDK5RAP2Q96SN8 1893 aa11.9□□□□□ -0.5
HDAC7-225ENST00000491464 PIH1D3Q9NQM4 214 aaKnown RBP11.9□□□□□ -0.5
HDAC7-225ENST00000491464 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
HDAC7-225ENST00000491464 AFG3L2Q9Y4W6 797 aa11.9□□□□□ -0.5
HDAC7-225ENST00000491464 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
HDAC7-225ENST00000491464 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
HDAC7-225ENST00000491464 APBB1O00213 710 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 HOXD10P28358 340 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 MOGSQ13724 837 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 TMED8Q6PL24 325 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-225ENST00000491464 MAPKAPK5Q8IW41 473 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-225ENST00000491464 RHPN1Q8TCX5 695 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 KIF1BPQ96EK5 621 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 PTCH2Q9Y6C5 1203 aa11.89□□□□□ -0.51
HDAC7-225ENST00000491464 FLT1P17948 1338 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 ZSWIM8A7E2V4 1837 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 RBBP6Q7Z6E9 1792 aaKnown RBP11.88□□□□□ -0.51
HDAC7-225ENST00000491464 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-225ENST00000491464 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-225ENST00000491464 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
HDAC7-225ENST00000491464 PSMC4P43686 418 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 CAP1Q01518 475 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 TTF1Q15361 905 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-225ENST00000491464 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 ADGRA1Q86SQ6 560 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 MAGEB6Q8N7X4 407 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-225ENST00000491464 ARHGAP39Q9C0H5 1083 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 BCL11AQ9H165 835 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 AS3MTQ9HBK9 375 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 SLC45A1Q9Y2W3 748 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 MYH1P12882 1939 aa11.88□□□□□ -0.51
HDAC7-225ENST00000491464 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 RAB11FIP3O75154 756 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 CYP2C8P10632 490 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 CAP2P40123 477 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 USP5P45974 858 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 CCDC84Q86UT8 332 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-225ENST00000491464 FOXP4Q8IVH2 680 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-225ENST00000491464 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-225ENST00000491464 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 NDUFB9Q9Y6M9 179 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 MGAMO43451 1857 aa11.87□□□□□ -0.51
HDAC7-225ENST00000491464 SIPA1L1O43166 1804 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 ASNSP08243 561 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 FCGRTP55899 365 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 DYNLL1P63167 89 aaKnown RBP11.86□□□□□ -0.51
HDAC7-225ENST00000491464 SPP2Q13103 211 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.51
HDAC7-225ENST00000491464 PDE3AQ14432 1141 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 SLC4A8Q2Y0W8 1093 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 PROCA1Q8NCQ7 364 aaPredicted RBP11.86□□□□□ -0.51
HDAC7-225ENST00000491464 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
HDAC7-225ENST00000491464 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
HDAC7-225ENST00000491464 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 BCRP11274 1271 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 OSBPP22059 807 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 HMGCS2P54868 508 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC7-225ENST00000491464 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
HDAC7-225ENST00000491464 ANTXR1Q9H6X2 564 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 CENPFP49454 3210 aa11.85□□□□□ -0.51
HDAC7-225ENST00000491464 MYCP01106 439 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-225ENST00000491464 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
HDAC7-225ENST00000491464 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
HDAC7-225ENST00000491464 SH3TC2Q8TF17 1288 aa11.84□□□□□ -0.51
HDAC7-225ENST00000491464 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
HDAC7-225ENST00000491464 BIN2Q9UBW5 565 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-225ENST00000491464 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 GOLIM4O00461 696 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.52
HDAC7-225ENST00000491464 GDF11O95390 407 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 PDE6AP16499 860 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 CTGFP29279 349 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 GRK4P32298 578 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 GCLCP48506 637 aaPredicted RBP11.83□□□□□ -0.52
HDAC7-225ENST00000491464 MTMR2Q13614 643 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 RRP1BQ14684 758 aaKnown RBP11.83□□□□□ -0.52
HDAC7-225ENST00000491464 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 SLC9C2Q5TAH2 1124 aa11.83□□□□□ -0.52
HDAC7-225ENST00000491464 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms