RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	HMGCS2	P54868	508 aa		23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	FAM109B	Q6ICB4	259 aa	Predicted RBP	23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	TRIB2	Q92519	343 aa		23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	ABCF2	Q9UG63	623 aa		23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	PTPRF	P10586	1907 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	XRCC5	P13010	732 aa	Known RBP	23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	CYP2B6	P20813	491 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	BTD	P43251	543 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MAP3K21	Q5TCX8	1036 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	TRMT44	Q8IYL2	757 aa	Known RBP	23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	NUDT12	Q9BQG2	462 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MORF4L1	Q9UBU8	362 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	DOCK2	Q92608	1830 aa		23.94	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	RFX7	Q2KHR2	1363 aa		23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	PFAS	O15067	1338 aa		23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	POTEB2	H3BUK9	544 aa		23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	NPM3	O75607	178 aa	Known RBP	23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	PRKAR2A	P13861	404 aa	Known RBP	23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MRPL50	Q8N5N7	158 aa	Known RBP	23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	SIL1	Q9H173	461 aa		23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MRS2	Q9HD23	443 aa		23.93	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	USP17L5	A8MUK1	530 aa		23.92	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	COL6A1	P12109	1028 aa		23.92	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	SH3D19	Q5HYK7	790 aa		23.92	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	CCDC102B	Q68D86	513 aa		23.92	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	DOCK1	Q14185	1865 aa		23.92	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	PHIP	Q8WWQ0	1821 aa		23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MYH2	Q9UKX2	1941 aa		23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	GPR75-ASB3	A0A0A6YYF3	556 aa		23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	CAP2	P40123	477 aa		23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	IRX3	P78415	501 aa	Predicted RBP	23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MDM2	Q00987	491 aa	Predicted RBP	23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	SOCS4	Q8WXH5	440 aa		23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	AS3MT	Q9HBK9	375 aa		23.91	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MAP4K4	O95819	1239 aa	Predicted RBP	23.9	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	IL15	P40933	162 aa	Predicted RBP	23.9	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	GPRC5A	Q8NFJ5	357 aa		23.9	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	LBHD1	Q9BQE6	289 aa	Predicted RBP	23.9	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	DDX60L	Q5H9U9	1706 aa	Known RBP	23.9	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	MROH7-TTC4	A0A0A0MT08	1334 aa		23.89	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	FAM196B	A6NMK8	535 aa		23.89	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	PDE3A	Q14432	1141 aa		23.89	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	LRRC26	Q2I0M4	334 aa		23.89	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	PDS5A	Q29RF7	1337 aa	Known RBP	23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	ZKSCAN1	P17029	563 aa	Predicted RBP	23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	RHBDL3	P58872	404 aa		23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	CACNB2	Q08289	660 aa	Predicted RBP	23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	RASGRF1	Q13972	1273 aa		23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	ERICH6	Q7L0X2	663 aa		23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	CCAR1	Q8IX12	1150 aa	Known RBP	23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	GUCD1	Q96NT3	240 aa		23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	P2RX7	Q99572	595 aa	Known RBP	23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	TMOD4	Q9NZQ9	345 aa		23.88	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	LDHC	P07864	332 aa		23.87	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	MAPK4	P31152	587 aa		23.87	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	HOXA7	P31268	230 aa	Predicted RBP	23.87	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	MECOM	Q03112	1051 aa		23.87	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	LHX8	Q68G74	356 aa		23.87	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	ADORA1	P30542	326 aa		23.86	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	GSTO1	P78417	241 aa		23.86	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	WDR18	Q9BV38	432 aa		23.86	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	HERC5	Q9UII4	1024 aa	Known RBP	23.86	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	RGS2	P41220	211 aa		23.85	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	BACE1	P56817	501 aa		23.85	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	TIMM10	P62072	90 aa		23.85	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	FAM161B	Q96MY7	647 aa		23.85	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	HDAC5	Q9UQL6	1122 aa		23.85	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	C19orf81	C9J6K1	198 aa		23.84	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	UBTFL1	P0CB47	393 aa	Predicted RBP	23.84	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	CCND3	P30281	292 aa	Predicted RBP	23.84	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	HERVK_113	P62684	666 aa		23.84	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	ZNF697	Q5TEC3	545 aa		23.84	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	MTMR2	Q13614	643 aa		23.83	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	RRP1B	Q14684	758 aa	Known RBP	23.83	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	USP6NL	Q92738	828 aa		23.83	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	TXNRD2	Q9NNW7	524 aa		23.83	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	RBPJL	Q9UBG7	517 aa		23.83	■■□□□ 1.41
CDK5RAP2-218	ENST00000491334	ASNS	P08243	561 aa		23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	GTF3C2	Q8WUA4	911 aa	Predicted RBP	23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	SENP6	Q9GZR1	1112 aa	Predicted RBP	23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PI4KB	Q9UBF8	816 aa		23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PRKAG2	Q9UGJ0	569 aa		23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	AKAP2	Q9Y2D5	859 aa		23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	LAMA2	P24043	3122 aa	Known RBP	23.82	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	LOC285556	D6RIA3	1793 aa		23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	MVP	Q14764	893 aa	Known RBP	23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	MORN1	Q5T089	497 aa		23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	GPR142	Q7Z601	462 aa		23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PLEKHH3	Q7Z736	793 aa		23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	SSH1	Q8WYL5	1049 aa		23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	CWC22	Q9HCG8	908 aa	Known RBP	23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PA2G4	Q9UQ80	394 aa	Known RBP	23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	COL2A1	P02458	1487 aa	Predicted RBP	23.81	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PLXNB2	O15031	1838 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PEX10	O60683	326 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	ERVK-9	P63128	1117 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	ERVK-24	P63145	666 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	CCL14	Q16627	93 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334		Q3C1V9	767 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	ZNF384	Q8TF68	577 aa		23.8	■■□□□ 1.4

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms