RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RFX7Q2KHR2 1363 aa20.12■□□□□ 0.81
PDLIM2-217ENST00000491330 FMNL1O95466 1100 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-217ENST00000491330 LACTBP83111 547 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-217ENST00000491330 SLC9C1Q4G0N8 1177 aa20.12■□□□□ 0.81
PDLIM2-217ENST00000491330 AFG3L2Q9Y4W6 797 aa20.12■□□□□ 0.81
PDLIM2-217ENST00000491330 AK9Q5TCS8 1911 aa20.12■□□□□ 0.81
PDLIM2-217ENST00000491330 A0A0G2JLL6 359 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 TRIM75PA6NK02 468 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 USP17L5A8MUK1 530 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 ASNSP08243 561 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 PRRT2Q7Z6L0 340 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 TTC6Q86TZ1 520 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 MAPKAPK5Q8IW41 473 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 MAGEB6Q8N7X4 407 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 PIH1D3Q9NQM4 214 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 TLR7Q9NYK1 1049 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-217ENST00000491330 MYH2Q9UKX2 1941 aa20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 CAP2P40123 477 aa20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 FCGRTP55899 365 aa20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 C17orf99Q6UX52 265 aa20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 ZNF280CQ8ND82 737 aa20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 CPA4Q9UI42 421 aa20.1■□□□□ 0.81
PDLIM2-217ENST00000491330 OSBPP22059 807 aa20.09■□□□□ 0.81
PDLIM2-217ENST00000491330 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDLIM2-217ENST00000491330 TMOD4Q9NZQ9 345 aa20.09■□□□□ 0.81
PDLIM2-217ENST00000491330 FLT1P17948 1338 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 PSMC4P43686 418 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 SPP2Q13103 211 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 PROCA1Q8NCQ7 364 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 RAET1EQ8TD07 263 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 DDRGK1Q96HY6 314 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 GPATCH3Q96I76 525 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 LRRCC1Q9C099 1032 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 AGTPBP1Q9UPW5 1226 aa20.08■□□□□ 0.81
PDLIM2-217ENST00000491330 OTOFQ9HC10 1997 aa20.08■□□□□ 0.8
PDLIM2-217ENST00000491330 MAGEB6P1A0A0J9YX57 407 aa20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 SLC9C2Q5TAH2 1124 aa20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 ZSCAN25Q6NSZ9 544 aa20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 AMOTL1Q8IY63 956 aa20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 MIGA1Q8NAN2 632 aa20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 ARMC5Q96C12 935 aa20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 CRNKL1Q9BZJ0 848 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 ZBTB47Q9UFB7 747 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-217ENST00000491330 CABP5Q9NP86 173 aa20.06■□□□□ 0.8
PDLIM2-217ENST00000491330 PALD1Q9ULE6 856 aa20.06■□□□□ 0.8
PDLIM2-217ENST00000491330 FAM196BA6NMK8 535 aa20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 C19orf81C9J6K1 198 aa20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 GOLIM4O00461 696 aa20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 CYP2C8P10632 490 aa20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 GCLCP48506 637 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 TRIM47Q96LD4 638 aa20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 BIN2Q9UBW5 565 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 SAP30BPQ9UHR5 308 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 PTCH2Q9Y6C5 1203 aa20.05■□□□□ 0.8
PDLIM2-217ENST00000491330 DYNLL1P63167 89 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 GPAT2Q6NUI2 795 aa20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 ADGRA1Q86SQ6 560 aa20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 COA7Q96BR5 231 aa20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 WDR18Q9BV38 432 aa20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 SRRDQ9UH36 339 aa20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 SERPINB13Q9UIV8 391 aa20.04■□□□□ 0.8
PDLIM2-217ENST00000491330 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
PDLIM2-217ENST00000491330 UBXN2AP68543 259 aa20.03■□□□□ 0.8
PDLIM2-217ENST00000491330 IRX3P78415 501 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-217ENST00000491330 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
PDLIM2-217ENST00000491330 PAG1Q9NWQ8 432 aa20.03■□□□□ 0.8
PDLIM2-217ENST00000491330 LAMB1P07942 1786 aa20.03■□□□□ 0.8
PDLIM2-217ENST00000491330 ECM2O94769 699 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 ATP5JP18859 108 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 HMGCS2P54868 508 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 MOGSQ13724 837 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 LRRFIP1Q32MZ4 808 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 CCAR1Q8IX12 1150 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 SIRT2Q8IXJ6 389 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 EHD4Q9H223 541 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 TAOK2Q9UL54 1235 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 NDUFB9Q9Y6M9 179 aa20.02■□□□□ 0.8
PDLIM2-217ENST00000491330 MYPNQ86TC9 1320 aa20.02■□□□□ 0.79
PDLIM2-217ENST00000491330 TNPO2O14787 897 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 PDE6AP16499 860 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 BACE1P56817 501 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 METTL16Q86W50 562 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 NKX2-3Q8TAU0 364 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 GTF3C2Q8WUA4 911 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 FEZ1Q99689 392 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 ARHGAP39Q9C0H5 1083 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 BOLA2Q9H3K6 86 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 DOCK2Q92608 1830 aa20.01■□□□□ 0.79
PDLIM2-217ENST00000491330 BCRP11274 1271 aa20■□□□□ 0.79
PDLIM2-217ENST00000491330 GRK4P32298 578 aa20■□□□□ 0.79
PDLIM2-217ENST00000491330 CERKLQ49MI3 558 aaPredicted RBP20■□□□□ 0.79
PDLIM2-217ENST00000491330 SH3D19Q5HYK7 790 aa20■□□□□ 0.79
PDLIM2-217ENST00000491330 ZNF333Q96JL9 665 aa20■□□□□ 0.79
PDLIM2-217ENST00000491330 MCM9Q9NXL9 1143 aa20■□□□□ 0.79
PDLIM2-217ENST00000491330 ZNF532Q9HCE3 1301 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms