RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FAM196BA6NMK8 535 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 PDHXO00330 501 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 POLR3DP05423 398 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-232ENST00000489053 PTPRAP18433 802 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
HDAC6-232ENST00000489053 SLC4A8Q2Y0W8 1093 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
HDAC6-232ENST00000489053 FBXO46Q6PJ61 603 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-232ENST00000489053 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 TTC6Q86TZ1 520 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 CD99L2Q8TCZ2 262 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 SMCR8Q8TEV9 937 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-232ENST00000489053 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 BOLA2Q9H3K6 86 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 CASP8AP2Q9UKL3 1982 aa11.04□□□□□ -0.64
HDAC6-232ENST00000489053 PHF20L1A8MW92 1017 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 SMARCA5O60264 1052 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-232ENST00000489053 ASNSP08243 561 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 PDE6AP16499 860 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 ATP5JP18859 108 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 PABPC4Q13310 644 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC6-232ENST00000489053 ADGRA1Q86SQ6 560 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 FOXP4Q8IVH2 680 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-232ENST00000489053 ECHDC1Q9NTX5 307 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 PALD1Q9ULE6 856 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-232ENST00000489053 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
HDAC6-232ENST00000489053 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
HDAC6-232ENST00000489053 TLR2O60603 784 aa11.02□□□□□ -0.65
HDAC6-232ENST00000489053 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
HDAC6-232ENST00000489053 HAUS7Q99871 368 aa11.02□□□□□ -0.65
HDAC6-232ENST00000489053 DCTPP1Q9H773 170 aa11.02□□□□□ -0.65
HDAC6-232ENST00000489053 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.65
HDAC6-232ENST00000489053 MAST2Q6P0Q8 1798 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 A0A0G2JLL6 359 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-232ENST00000489053 ERC2O15083 957 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 ECM2O94769 699 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-232ENST00000489053 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-232ENST00000489053 HOXD10P28358 340 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 CAP2P40123 477 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 MAP3K10Q02779 954 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 MLLT1Q03111 559 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-232ENST00000489053 SPP2Q13103 211 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 PRRT2Q7Z6L0 340 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-232ENST00000489053 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 FEZ1Q99689 392 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 GINM1Q9NU53 330 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 MCM9Q9NXL9 1143 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 CPA4Q9UI42 421 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 SERPINB13Q9UIV8 391 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 AFG3L2Q9Y4W6 797 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
HDAC6-232ENST00000489053 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
HDAC6-232ENST00000489053 MBD4O95243 580 aa11□□□□□ -0.65
HDAC6-232ENST00000489053 GDF11O95390 407 aa11□□□□□ -0.65
HDAC6-232ENST00000489053 OSBPP22059 807 aa11□□□□□ -0.65
HDAC6-232ENST00000489053 SOX10P56693 466 aa11□□□□□ -0.65
HDAC6-232ENST00000489053 NBPF11Q86T75 865 aa11□□□□□ -0.65
HDAC6-232ENST00000489053 GNRH1P01148 92 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 CYP2C8P10632 490 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 HMGCS2P54868 508 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 IRX3P78415 501 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-232ENST00000489053 AAMPQ13685 434 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 SLC9C1Q4G0N8 1177 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 CCDC84Q86UT8 332 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-232ENST00000489053 CCAR1Q8IX12 1150 aaKnown RBP10.99□□□□□ -0.65
HDAC6-232ENST00000489053 EDC3Q96F86 508 aaKnown RBP10.99□□□□□ -0.65
HDAC6-232ENST00000489053 ARMT1Q9H993 441 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
HDAC6-232ENST00000489053 AGTPBP1Q9UPW5 1226 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 SLC45A1Q9Y2W3 748 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 DOCK2Q92608 1830 aa10.99□□□□□ -0.65
HDAC6-232ENST00000489053 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 ADD2P35612 726 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 PSMC4P43686 418 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 PRMT2P55345 433 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 FCGRTP55899 365 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-232ENST00000489053 MTMR2Q13614 643 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-232ENST00000489053 ANKRD45Q5TZF3 282 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 PROCA1Q8NCQ7 364 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-232ENST00000489053 RAET1EQ8TD07 263 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 RIOK1Q9BRS2 568 aaKnown RBP10.98□□□□□ -0.65
HDAC6-232ENST00000489053 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 EHD4Q9H223 541 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 RWDD1Q9H446 243 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms