RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TRIM50Q86XT4 487 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 KIF1BPQ96EK5 621 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 PLVAPQ9BX97 442 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 RGPD2P0DJD1 1756 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 SCN11AQ9UI33 1791 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 NHSL1Q5SYE7 1610 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 MEGF6O75095 1541 aa8.1□□□□□ -1.11
PDCD4-209ENST00000489049 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
PDCD4-209ENST00000489049 CYP27B1O15528 508 aa8.1□□□□□ -1.11
PDCD4-209ENST00000489049 SIN3BO75182 1162 aa8.1□□□□□ -1.11
PDCD4-209ENST00000489049 TPCN2Q8NHX9 752 aa8.1□□□□□ -1.11
PDCD4-209ENST00000489049 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
PDCD4-209ENST00000489049 KIAA1024Q9UPX6 916 aa8.1□□□□□ -1.11
PDCD4-209ENST00000489049 LRRFIP2Q9Y608 721 aaKnown RBP8.1□□□□□ -1.11
PDCD4-209ENST00000489049 KDM6AO15550 1401 aaPredicted RBP8.1□□□□□ -1.11
PDCD4-209ENST00000489049 COL5A2P05997 1499 aaPredicted RBP8.09□□□□□ -1.11
PDCD4-209ENST00000489049 SPATA31C1P0DKV0 1188 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 ALAS2P22557 587 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 PDE1AP54750 535 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 SFSWAPQ12872 951 aaKnown RBP8.09□□□□□ -1.11
PDCD4-209ENST00000489049 CHRNA2Q15822 529 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 RHPN1Q8TCX5 695 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 PHAXQ9H814 394 aaKnown RBP8.09□□□□□ -1.11
PDCD4-209ENST00000489049 NEUROD4Q9HD90 331 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 RGPD5Q99666 1765 aa8.09□□□□□ -1.11
PDCD4-209ENST00000489049 ADCY9O60503 1353 aa8.09□□□□□ -1.12
PDCD4-209ENST00000489049 USP42Q9H9J4 1324 aaKnown RBP8.08□□□□□ -1.12
PDCD4-209ENST00000489049 AHDC1Q5TGY3 1603 aaPredicted RBP8.08□□□□□ -1.12
PDCD4-209ENST00000489049 USP17L3A6NCW0 530 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 USP17L4A6NCW7 530 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 GRM8O00222 908 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 KCNQ3O43525 872 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 MX1P20591 662 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 ATP1A2P50993 1020 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
PDCD4-209ENST00000489049 PSMA6P60900 246 aaKnown RBP8.08□□□□□ -1.12
PDCD4-209ENST00000489049 CLDN10P78369 228 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 RABEP1Q15276 862 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 CCDC102BQ68D86 513 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 USP17L2Q6R6M4 530 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 USP17L1Q7RTZ2 530 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 PPP1R42Q7Z4L9 355 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 HSCBQ8IWL3 235 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 DDX17Q92841 729 aaKnown RBP8.08□□□□□ -1.12
PDCD4-209ENST00000489049 UCN2Q96RP3 112 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 SLC30A3Q99726 388 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 METTL22Q9BUU2 404 aaPredicted RBP8.08□□□□□ -1.12
PDCD4-209ENST00000489049 MAP3K2Q9Y2U5 619 aa8.08□□□□□ -1.12
PDCD4-209ENST00000489049 TTC41PQ6P2S7 1318 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 ERC2O15083 957 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 SRGAP3O43295 1099 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 HIRAP54198 1017 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-209ENST00000489049 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 PLBD2Q8NHP8 589 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 GLMNQ92990 594 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 TNFRSF25Q93038 417 aa8.07□□□□□ -1.12
PDCD4-209ENST00000489049 ZNF496Q96IT1 587 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-209ENST00000489049 TSPAN10Q9H1Z9 355 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-209ENST00000489049 THRAP3Q9Y2W1 955 aaKnown RBP8.07□□□□□ -1.12
PDCD4-209ENST00000489049 SALL3Q9BXA9 1300 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 PNMA6EA0A0J9YXQ4 647 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 SURF6O75683 361 aaKnown RBP8.06□□□□□ -1.12
PDCD4-209ENST00000489049 GLRX3O76003 335 aaKnown RBP8.06□□□□□ -1.12
PDCD4-209ENST00000489049 SDSP20132 328 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 MCCP23508 829 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 MCM2P49736 904 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 ANAPC15P60006 121 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 DOC2BQ14184 412 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 C1orf53Q5VUE5 145 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 CLASRPQ8N2M8 674 aaKnown RBP8.06□□□□□ -1.12
PDCD4-209ENST00000489049 Q8N3U1 123 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 COL14A1Q05707 1796 aaKnown RBP8.06□□□□□ -1.12
PDCD4-209ENST00000489049 LTBP4Q8N2S1 1624 aa8.06□□□□□ -1.12
PDCD4-209ENST00000489049 COL22A1Q8NFW1 1626 aaPredicted RBP8.05□□□□□ -1.12
PDCD4-209ENST00000489049 SPDYE3A6NKU9 549 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 M0R082 166 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 M0R2N6 131 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 HIP1O00291 1037 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 ATP9BO43861 1147 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 STARD3NLO95772 234 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 GSPT1P15170 499 aaKnown RBP8.05□□□□□ -1.12
PDCD4-209ENST00000489049 PTMSP20962 102 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 ITGB7P26010 798 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 GATA4P43694 442 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 SPEM2Q0P670 501 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 TRIM28Q13263 835 aaKnown RBP8.05□□□□□ -1.12
PDCD4-209ENST00000489049 G3BP1Q13283 466 aaKnown RBP eCLIP8.05□□□□□ -1.124e-14■■■■■ 27.2
PDCD4-209ENST00000489049 GCKRQ14397 625 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 CCDC82Q8N4S0 544 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 ZNF417Q8TAU3 575 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 IL17RAQ96F46 866 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 HSH2DQ96JZ2 352 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 ZNF587Q96SQ5 575 aaPredicted RBP8.05□□□□□ -1.12
PDCD4-209ENST00000489049 PHACTR1Q9C0D0 580 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 CHMP5Q9NZZ3 219 aa8.05□□□□□ -1.12
PDCD4-209ENST00000489049 CHMP3Q9Y3E7 222 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms