RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CYP4F12Q9HCS2 524 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 PICK1Q9NRD5 415 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
PRPF38A-203ENST00000487160 DRD2P14416 443 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 BMS1Q14692 1282 aaKnown RBP7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 LRRFIP1Q32MZ4 808 aaKnown RBP7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 TNNI3KQ59H18 835 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 PRRT3Q5FWE3 981 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 SHISA2Q6UWI4 295 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 NOP9Q86U38 636 aaKnown RBP7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 AGGF1Q8N302 714 aaeCLIP7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 SMG8Q8ND04 991 aaKnown RBP7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 TMEM40Q8WWA1 233 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 TNKS2Q9H2K2 1166 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 SUGCTQ9HAC7 445 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 DISC1Q9NRI5 854 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 AP4E1Q9UPM8 1137 aa7.5□□□□□ -1.21
PRPF38A-203ENST00000487160 SLC22A31A6NKX4 558 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 MEIS3P2A8K0S8 358 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 U2SURPO15042 1029 aaKnown RBP7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 SMARCA5O60264 1052 aaPredicted RBP7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 DNAJA2O60884 412 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 ADH5P11766 374 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 MLECQ14165 292 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 PPP2R5EQ16537 467 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 TMEM201Q5SNT2 666 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 ZBTB37Q5TC79 503 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 C12orf50Q8NA57 414 aaPredicted RBP7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 ACTR10Q9NZ32 417 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 NOP53Q9NZM5 478 aaKnown RBP7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 SIRPGQ9P1W8 387 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 CDK11AQ9UQ88 783 aaPredicted RBP7.49□□□□□ -1.21
PRPF38A-203ENST00000487160 CHURC1-FNTBB4DL54 471 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 K7ELQ4 463 aaPredicted RBP7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 FANCGO15287 622 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ALX3O95076 343 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 CASP7P55210 303 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 OVOS1Q6IE37 1185 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 DYMQ7RTS9 669 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 PODNQ7Z5L7 613 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 TMEM130Q8N3G9 435 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 CELF2-AS1Q8N7Q2 184 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 BEND7Q8N7W2 519 aaPredicted RBP7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ZSCAN1Q8NBB4 408 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 RNF214Q8ND24 703 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ACSF2Q96CM8 615 aaPredicted RBP7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ATG4CQ96DT6 458 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ATXN3LQ9H3M9 355 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 GMIPQ9P107 970 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ADAM30Q9UKF2 790 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 ADAMTS8Q9UP79 889 aa7.48□□□□□ -1.21
PRPF38A-203ENST00000487160 F8W735 103 aaPredicted RBP7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 HCLS1P14317 486 aaPredicted RBP7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 GUCY2CP25092 1073 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 NTF4P34130 210 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 TTLL4Q14679 1199 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 ZNF507Q8TCN5 953 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 MKL1Q969V6 931 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 TM9SF2Q99805 663 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 ST7Q9NRC1 585 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 TJP2Q9UDY2 1190 aa7.47□□□□□ -1.21
PRPF38A-203ENST00000487160 A0A1W2PQH9 124 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 TIAF1O95411 115 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 NEFMP07197 916 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 NME1P15531 152 aaKnown RBP7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 ARSHQ5FYA8 562 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 LARP1BQ659C4 914 aaKnown RBP7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 FDX2Q6P4F2 183 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 TTC6Q86TZ1 520 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 FAM177A1Q8N128 213 aaPredicted RBP7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 MRFAP1L1Q96HT8 127 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 FBRSQ9HAH7 460 aa7.46□□□□□ -1.22
PRPF38A-203ENST00000487160 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 ACRP10323 421 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 ASPAP45381 313 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 ZYXQ15942 572 aaKnown RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 CDCP2Q5VXM1 449 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 UBE3DQ7Z6J8 389 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 HID1Q8IV36 788 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 MCATQ8IVS2 390 aaKnown RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 C19orf47Q8N9M1 422 aaKnown RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 C2CD4AQ8NCU7 369 aaPredicted RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 FAM13CQ8NE31 585 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 MICAL1Q8TDZ2 1067 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 TMEM87BQ96K49 555 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 SRPK1Q96SB4 655 aaKnown RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 CNNM2Q9H8M5 875 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 AKTIPQ9H8T0 292 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 USP21Q9UK80 565 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 ACTL7BQ9Y614 415 aa7.45□□□□□ -1.22
PRPF38A-203ENST00000487160 SPATA31C1P0DKV0 1188 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms