RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DDX11Q96FC9 970 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 MAP3K14Q99558 947 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 INCENPQ9NQS7 918 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 TOMM22Q9NS69 142 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
PRKCB-207ENST00000486868 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
PRKCB-207ENST00000486868 JAG2Q9Y219 1238 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
PRKCB-207ENST00000486868 CHRNA5P30532 468 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 DGKHQ86XP1 1220 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 ZNF654Q8IZM8 581 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 SYAP1Q96A49 352 aaPredicted RBP13.57□□□□□ -0.24
PRKCB-207ENST00000486868 RBM28Q9NW13 759 aaKnown RBP13.57□□□□□ -0.24
PRKCB-207ENST00000486868 CFAP45Q9UL16 551 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 TNKSO95271 1327 aa13.57□□□□□ -0.24
PRKCB-207ENST00000486868 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 RANBP6O60518 1105 aaKnown RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 FMNL1O95466 1100 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 IARSP41252 1262 aaKnown RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 RTN1Q16799 776 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 IFIT1BQ5T764 474 aaKnown RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 CATIPQ7Z7H3 387 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 CERS5Q8N5B7 392 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 ENAHQ8N8S7 591 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-207ENST00000486868 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 TEKT1Q969V4 418 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 C8orf76Q96K31 380 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 ZDHHC15Q96MV8 337 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 MYO3BQ8WXR4 1341 aa13.56□□□□□ -0.24
PRKCB-207ENST00000486868 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 FSD2A1L4K1 749 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 ECE2O60344 883 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 POLR3DP05423 398 aaPredicted RBP13.55□□□□□ -0.24
PRKCB-207ENST00000486868 CDC27P30260 824 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 ADD1P35611 737 aaKnown RBP13.55□□□□□ -0.24
PRKCB-207ENST00000486868 ZNF445P59923 1031 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
PRKCB-207ENST00000486868 DOK7Q18PE1 504 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 DACT2Q5SW24 774 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 L1TD1Q5T7N2 865 aaKnown RBP13.55□□□□□ -0.24
PRKCB-207ENST00000486868 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 C16orf86Q6ZW13 317 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 MICU3Q86XE3 530 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 GPT2Q8TD30 523 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 ZNF396Q96N95 335 aaPredicted RBP13.55□□□□□ -0.24
PRKCB-207ENST00000486868 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
PRKCB-207ENST00000486868 CNPY2Q9Y2B0 182 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 FLT1P17948 1338 aa13.55□□□□□ -0.24
PRKCB-207ENST00000486868 DEXIO95424 95 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 KCNA3P22001 575 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 POLD1P28340 1107 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 NOVP48745 357 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 MMP14P50281 582 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 TROAPQ12815 778 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 ZNF444Q8N0Y2 327 aaPredicted RBP13.54□□□□□ -0.24
PRKCB-207ENST00000486868 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
PRKCB-207ENST00000486868 RNF26Q9BY78 433 aaPredicted RBP13.54□□□□□ -0.24
PRKCB-207ENST00000486868 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
PRKCB-207ENST00000486868 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
PRKCB-207ENST00000486868 TSPY2A6NKD2 308 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 LETM1O95202 739 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-207ENST00000486868 CYP2D6P10635 497 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 APOBEC3HQ6NTF7 200 aaKnown RBP13.53□□□□□ -0.24
PRKCB-207ENST00000486868 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-207ENST00000486868 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 MKNK2Q9HBH9 465 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 RCOR1Q9UKL0 485 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
PRKCB-207ENST00000486868 PRPF3O43395 683 aaKnown RBP13.52□□□□□ -0.25
PRKCB-207ENST00000486868 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-207ENST00000486868 DPEP1P16444 411 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 RASA1P20936 1047 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 KIF5BP33176 963 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 CRKP46108 304 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 CDK8P49336 464 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 GNAQP50148 359 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 GABPAQ06546 454 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 NBPF11Q86T75 865 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 FERMT3Q86UX7 667 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 ZKSCAN3Q9BRR0 538 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-207ENST00000486868 EHD4Q9H223 541 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms