RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 KIAA1468Q9P260 1216 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 REREQ9P2R6 1566 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 AK9Q5TCS8 1911 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
HMGN1-216ENST00000486741 NEMFO60524 1076 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 CCDC12Q8WUD4 166 aaPredicted RBP15.07■□□□□ 0
HMGN1-216ENST00000486741 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
HMGN1-216ENST00000486741 TRIM47Q96LD4 638 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
HMGN1-216ENST00000486741 MST1RQ04912 1400 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 PXDNLA1KZ92 1463 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 MTIF2P46199 727 aaKnown RBP15.07■□□□□ 0
HMGN1-216ENST00000486741 MYL5Q02045 173 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 GPKOWQ92917 476 aaPredicted RBP eCLIP15.07■□□□□ 02e-6■■■■□ 20.4
HMGN1-216ENST00000486741 SERTAD1Q9UHV2 236 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 DNAI1Q9UI46 699 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 DOK7Q18PE1 504 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 TMEM266Q2M3C6 531 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 JAKMIP3Q5VZ66 844 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 TBC1D9BQ66K14 1250 aa15.07■□□□□ 0
HMGN1-216ENST00000486741 RPAP1Q9BWH6 1393 aaPredicted RBP15.07■□□□□ 0
HMGN1-216ENST00000486741 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 PRDX5P30044 214 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 GNG11P61952 73 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 CLEC17AQ6ZS10 378 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 C11orf57Q6ZUT1 292 aaPredicted RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 CALML3P27482 149 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 SCNN1DP51172 638 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 DNA2P51530 1060 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 CALML4Q96GE6 196 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 MED23Q9ULK4 1368 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 SH2B2O14492 632 aaPredicted RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 NEDD4P46934 1319 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 TTC38Q5R3I4 469 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 RBM28Q9NW13 759 aaKnown RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 RCOR1Q9UKL0 485 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 PARP3Q9Y6F1 533 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 CUTAO60888 179 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 ERCC3P19447 782 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 CCT6AP40227 531 aaKnown RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 ASIC1P78348 528 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 COL9A3Q14050 684 aaPredicted RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 MTERF4Q7Z6M4 381 aaKnown RBP15.06■□□□□ 0
HMGN1-216ENST00000486741 BLZF1Q9H2G9 400 aa15.06■□□□□ 0
HMGN1-216ENST00000486741 ZSCAN12O43309 604 aa15.05■□□□□ 0
HMGN1-216ENST00000486741 USP17L8P0C7I0 530 aa15.05■□□□□ 0
HMGN1-216ENST00000486741 ITPK1Q13572 414 aa15.05■□□□□ 0
HMGN1-216ENST00000486741 KIF4BQ2VIQ3 1234 aa15.05■□□□□ 0
HMGN1-216ENST00000486741 DTHD1Q6ZMT9 781 aa15.05■□□□□ 0
HMGN1-216ENST00000486741 KIAA1328Q86T90 577 aa15.05■□□□□ 0
HMGN1-216ENST00000486741 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
HMGN1-216ENST00000486741 FANCCQ00597 558 aa15.05■□□□□ -0
HMGN1-216ENST00000486741 TEX35Q5T0J7 233 aa15.05■□□□□ -0
HMGN1-216ENST00000486741 RRP36Q96EU6 259 aaKnown RBP15.05■□□□□ -0
HMGN1-216ENST00000486741 DYNLL2Q96FJ2 89 aa15.05■□□□□ -0
HMGN1-216ENST00000486741 XPO4Q9C0E2 1151 aaKnown RBP15.05■□□□□ -0
HMGN1-216ENST00000486741 LINC00301Q8NCQ3 95 aa15.05■□□□□ -0
HMGN1-216ENST00000486741 MINPP1Q9UNW1 487 aa15.05■□□□□ -0
HMGN1-216ENST00000486741 COBLO75128 1261 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 BMP15O95972 392 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 DPCR1Q3MIW9 517 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 IQUBQ8NA54 791 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 RAB34Q9BZG1 259 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 CCDC70Q6NSX1 233 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 GPIHBP1Q8IV16 184 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 CCDC150Q8NCX0 1101 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 RASGRP4Q8TDF6 673 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 RTEL1Q9NZ71 1219 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 NFE2L3Q9Y4A8 694 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 CYP2D6P10635 497 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 EEF2KMTQ96G04 330 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 CEP89Q96ST8 783 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 VEZTQ9HBM0 779 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 C6orf50Q9HD87 102 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
HMGN1-216ENST00000486741 APBA3O96018 575 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 PLCG2P16885 1265 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 RBM26Q5T8P6 1007 aaKnown RBP15.03■□□□□ -0
HMGN1-216ENST00000486741 DPP8Q6V1X1 898 aaPredicted RBP15.03■□□□□ -0
HMGN1-216ENST00000486741 GRAMD1CQ8IYS0 662 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 PNMA1Q8ND90 353 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 CDC27P30260 824 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 MECOMQ03112 1051 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 KARSQ15046 597 aaKnown RBP15.03■□□□□ -0
HMGN1-216ENST00000486741 FEZ1Q99689 392 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 QTRT2Q9H974 415 aaKnown RBP15.03■□□□□ -0
HMGN1-216ENST00000486741 CDHR2Q9BYE9 1310 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 CSF1RP07333 972 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 NLRP12P59046 1061 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
HMGN1-216ENST00000486741 CDC25AP30304 524 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 POSTNQ15063 836 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 SYT10Q6XYQ8 523 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.03■□□□□ -0
HMGN1-216ENST00000486741 SENP2Q9HC62 589 aa15.03■□□□□ -0
HMGN1-216ENST00000486741 NMT2O60551 498 aa15.02■□□□□ -0
HMGN1-216ENST00000486741 PRIMPOLQ96LW4 560 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms