RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 PLCD1P51178 756 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 MAP3K9P80192 1104 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 VPS53Q5VIR6 699 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 METTL16Q86W50 562 aaKnown RBP28.29■■■□□ 2.12
ABCF3-216ENST00000485921 AMOTL1Q8IY63 956 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 IFNL3Q8IZI9 196 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 CRACR2BQ8N4Y2 399 aaPredicted RBP28.29■■■□□ 2.12
ABCF3-216ENST00000485921 RUFY2Q8WXA3 655 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 HERC5Q9UII4 1024 aaKnown RBP28.29■■■□□ 2.12
ABCF3-216ENST00000485921 TDO2P48775 406 aa28.28■■■□□ 2.12
ABCF3-216ENST00000485921 CTR9Q6PD62 1173 aa28.28■■■□□ 2.12
ABCF3-216ENST00000485921 ANKRD13AQ8IZ07 590 aa28.28■■■□□ 2.12
ABCF3-216ENST00000485921 TRIM34Q9BYJ4 488 aa28.28■■■□□ 2.12
ABCF3-216ENST00000485921 EHD4Q9H223 541 aa28.28■■■□□ 2.12
ABCF3-216ENST00000485921 ZNF112Q9UJU3 913 aa28.28■■■□□ 2.12
ABCF3-216ENST00000485921 DDX60LQ5H9U9 1706 aaKnown RBP28.28■■■□□ 2.12
ABCF3-216ENST00000485921 UNCXA6NJT0 531 aa28.27■■■□□ 2.12
ABCF3-216ENST00000485921 FOXP2O15409 715 aa28.27■■■□□ 2.12
ABCF3-216ENST00000485921 C12orf60Q5U649 245 aa28.27■■■□□ 2.12
ABCF3-216ENST00000485921 RGMBQ6NW40 437 aa28.27■■■□□ 2.12
ABCF3-216ENST00000485921 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.27■■■□□ 2.12
ABCF3-216ENST00000485921 PAXIP1Q6ZW49 1069 aaPredicted RBP28.27■■■□□ 2.12
ABCF3-216ENST00000485921 CLMNQ96JQ2 1002 aa28.27■■■□□ 2.12
ABCF3-216ENST00000485921 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.27■■■□□ 2.12
ABCF3-216ENST00000485921 ARPP21Q9UBL0 812 aaPredicted RBP28.27■■■□□ 2.12
ABCF3-216ENST00000485921 SERPINB13Q9UIV8 391 aa28.27■■■□□ 2.12
ABCF3-216ENST00000485921 BAZ2AQ9UIF9 1905 aaKnown RBP28.26■■■□□ 2.11
ABCF3-216ENST00000485921 CYP2D7A0A087X1C5 515 aa28.26■■■□□ 2.11
ABCF3-216ENST00000485921 PHF20L1A8MW92 1017 aa28.26■■■□□ 2.11
ABCF3-216ENST00000485921 ZNF157P51786 506 aaPredicted RBP28.26■■■□□ 2.11
ABCF3-216ENST00000485921 EVX2Q03828 476 aa28.26■■■□□ 2.11
ABCF3-216ENST00000485921 SBK1Q52WX2 424 aa28.26■■■□□ 2.11
ABCF3-216ENST00000485921 SIPA1L1O43166 1804 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 RAD50Q92878 1312 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 HSPD1P10809 573 aaKnown RBP28.25■■■□□ 2.11
ABCF3-216ENST00000485921 INPP5BP32019 993 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 VGLL4Q14135 290 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 ZKSCAN4Q969J2 545 aaPredicted RBP28.25■■■□□ 2.11
ABCF3-216ENST00000485921 SLC10A4Q96EP9 437 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 NAPBQ9H115 298 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 IL25Q9H293 177 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 DNAJC18Q9H819 358 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 CSADQ9Y600 493 aa28.25■■■□□ 2.11
ABCF3-216ENST00000485921 CYP4F22Q6NT55 531 aa28.24■■■□□ 2.11
ABCF3-216ENST00000485921 MINDY4BA8MYZ0 360 aa28.23■■■□□ 2.11
ABCF3-216ENST00000485921 ALX1Q15699 326 aa28.23■■■□□ 2.11
ABCF3-216ENST00000485921 ELP3Q9H9T3 547 aa28.23■■■□□ 2.11
ABCF3-216ENST00000485921 SMIM22K7EJ46 135 aa28.22■■■□□ 2.11
ABCF3-216ENST00000485921 CDC45O75419 566 aa28.22■■■□□ 2.11
ABCF3-216ENST00000485921 GABPAQ06546 454 aa28.22■■■□□ 2.11
ABCF3-216ENST00000485921 GRM1Q13255 1194 aa28.22■■■□□ 2.11
ABCF3-216ENST00000485921 CCDC102AQ96A19 550 aa28.22■■■□□ 2.11
ABCF3-216ENST00000485921 CAPNS2Q96L46 248 aa28.22■■■□□ 2.11
ABCF3-216ENST00000485921 SGSM2O43147 1006 aa28.21■■■□□ 2.11
ABCF3-216ENST00000485921 CTNND1O60716 968 aaKnown RBP28.21■■■□□ 2.11
ABCF3-216ENST00000485921 ECE1P42892 770 aa28.21■■■□□ 2.11
ABCF3-216ENST00000485921 DYNLL2Q96FJ2 89 aa28.21■■■□□ 2.11
ABCF3-216ENST00000485921 SNCAIPQ9Y6H5 919 aa28.21■■■□□ 2.11
ABCF3-216ENST00000485921 OTOFQ9HC10 1997 aa28.2■■■□□ 2.11
ABCF3-216ENST00000485921 FGAP02671 866 aa28.2■■■□□ 2.1
ABCF3-216ENST00000485921 VEGFBP49765 207 aa28.2■■■□□ 2.1
ABCF3-216ENST00000485921 RRP1BQ14684 758 aaKnown RBP28.2■■■□□ 2.1
ABCF3-216ENST00000485921 NOL9Q5SY16 702 aaKnown RBP28.2■■■□□ 2.1
ABCF3-216ENST00000485921 TATDN1Q6P1N9 297 aa28.2■■■□□ 2.1
ABCF3-216ENST00000485921 CASC1Q6TDU7 716 aa28.2■■■□□ 2.1
ABCF3-216ENST00000485921 RASAL3Q86YV0 1011 aa28.2■■■□□ 2.1
ABCF3-216ENST00000485921 TAOK2Q9UL54 1235 aa28.2■■■□□ 2.1
ABCF3-216ENST00000485921 SLC10A3P09131 477 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 SHMT1P34896 483 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 SCYL3Q8IZE3 742 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 DNAJC5GQ8N7S2 189 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 SLC44A5Q8NCS7 719 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 ESYT1Q9BSJ8 1104 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 DSCC1Q9BVC3 393 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 SWAP70Q9UH65 585 aa28.19■■■□□ 2.1
ABCF3-216ENST00000485921 WDR33Q9C0J8 1336 aaKnown RBP28.18■■■□□ 2.1
ABCF3-216ENST00000485921 FAM155AB1AL88 458 aaPredicted RBP28.18■■■□□ 2.1
ABCF3-216ENST00000485921 CAP2P40123 477 aa28.18■■■□□ 2.1
ABCF3-216ENST00000485921 C16orf86Q6ZW13 317 aa28.18■■■□□ 2.1
ABCF3-216ENST00000485921 CDK8P49336 464 aa28.17■■■□□ 2.1
ABCF3-216ENST00000485921 PPARAQ07869 468 aa28.17■■■□□ 2.1
ABCF3-216ENST00000485921 STK11IPQ8N1F8 1099 aa28.17■■■□□ 2.1
ABCF3-216ENST00000485921 WNK4Q96J92 1243 aa28.17■■■□□ 2.1
ABCF3-216ENST00000485921 PICK1Q9NRD5 415 aa28.17■■■□□ 2.1
ABCF3-216ENST00000485921 ZMYM6O95789 1325 aa28.17■■■□□ 2.1
ABCF3-216ENST00000485921 CERKLQ49MI3 558 aaPredicted RBP28.16■■■□□ 2.1
ABCF3-216ENST00000485921 ERO1BQ86YB8 467 aa28.16■■■□□ 2.1
ABCF3-216ENST00000485921 CNKSR2Q8WXI2 1034 aa28.16■■■□□ 2.1
ABCF3-216ENST00000485921 OPTNQ96CV9 577 aa28.16■■■□□ 2.1
ABCF3-216ENST00000485921 ROBO3Q96MS0 1386 aa28.15■■■□□ 2.1
ABCF3-216ENST00000485921 SPDYE5A6NIY4 337 aa28.15■■■□□ 2.1
ABCF3-216ENST00000485921 GDF11O95390 407 aa28.15■■■□□ 2.1
ABCF3-216ENST00000485921 MKRN3Q13064 507 aaKnown RBP28.15■■■□□ 2.1
ABCF3-216ENST00000485921 SPRYD7Q5W111 196 aa28.15■■■□□ 2.1
ABCF3-216ENST00000485921 SLC3A2P08195 630 aaKnown RBP28.14■■■□□ 2.1
ABCF3-216ENST00000485921 GJA5P36382 358 aa28.14■■■□□ 2.1
ABCF3-216ENST00000485921 JAG1P78504 1218 aa28.14■■■□□ 2.1
ABCF3-216ENST00000485921 PTH1RQ03431 593 aa28.14■■■□□ 2.1
ABCF3-216ENST00000485921 KIAA1211Q6ZU35 1233 aa28.14■■■□□ 2.1
ABCF3-216ENST00000485921 OTUD5Q96G74 571 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms