RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZDHHC1Q8WTX9 485 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 AKAP11Q9UKA4 1901 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 A0A087WZG4 1122 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 NEURL1BA8MQ27 555 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 PROCP04070 461 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 FAM157BP0CG42 384 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 CD33P20138 364 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 COL8A1P27658 744 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 TXLNAP40222 546 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 ST5P78524 1137 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 LINC00114Q6XXX2 140 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 KLF15Q9UIH9 416 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 SNED1Q8TER0 1413 aa9.03□□□□□ -0.96
SMC4-217ENST00000485867 KHNYNO15037 678 aaKnown RBP9.02□□□□□ -0.97
SMC4-217ENST00000485867 IARSP41252 1262 aaKnown RBP9.02□□□□□ -0.97
SMC4-217ENST00000485867 TNNT2P45379 298 aaPredicted RBP9.02□□□□□ -0.97
SMC4-217ENST00000485867 TEAD4Q15561 434 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 OLFM4Q6UX06 510 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 SAPCD2Q86UD0 394 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 PLEKHM2Q8IWE5 1019 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 BTBD6Q96KE9 485 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
SMC4-217ENST00000485867 KRBA1A5PL33 1030 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 NPHP1O15259 732 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 EFSO43281 561 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 AMPD1P23109 780 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
SMC4-217ENST00000485867 EPS15P42566 896 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 AKAP4Q5JQC9 854 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 ALYREFQ86V81 257 aaKnown RBP9.01□□□□□ -0.97
SMC4-217ENST00000485867 RTKN2Q8IZC4 609 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 HHIPL1Q96JK4 782 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 SETDB2Q96T68 719 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 AVENQ9NQS1 362 aaPredicted RBP9.01□□□□□ -0.97
SMC4-217ENST00000485867 KIAA1024Q9UPX6 916 aa9.01□□□□□ -0.97
SMC4-217ENST00000485867 SIPA1L3O60292 1781 aaPredicted RBP9.01□□□□□ -0.97
SMC4-217ENST00000485867 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
SMC4-217ENST00000485867 RNMTO43148 476 aaKnown RBP9□□□□□ -0.97
SMC4-217ENST00000485867 CAMTA2O94983 1202 aa9□□□□□ -0.97
SMC4-217ENST00000485867 STARD3NLO95772 234 aa9□□□□□ -0.97
SMC4-217ENST00000485867 NPR1P16066 1061 aa9□□□□□ -0.97
SMC4-217ENST00000485867 ADH6P28332 368 aa9□□□□□ -0.97
SMC4-217ENST00000485867 DGKGP49619 791 aa9□□□□□ -0.97
SMC4-217ENST00000485867 SULT6B1Q6IMI4 303 aa9□□□□□ -0.97
SMC4-217ENST00000485867 FCHSD1Q86WN1 690 aa9□□□□□ -0.97
SMC4-217ENST00000485867 TRIM50Q86XT4 487 aa9□□□□□ -0.97
SMC4-217ENST00000485867 SLC9A9Q8IVB4 645 aa9□□□□□ -0.97
SMC4-217ENST00000485867 SYNE4Q8N205 404 aa9□□□□□ -0.97
SMC4-217ENST00000485867 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
SMC4-217ENST00000485867 KLRG2A4D1S0 409 aaPredicted RBP8.99□□□□□ -0.97
SMC4-217ENST00000485867 USP17L3A6NCW0 530 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 USP17L4A6NCW7 530 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 EML1O00423 815 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 CELF2O95319 508 aaKnown RBP8.99□□□□□ -0.97
SMC4-217ENST00000485867 NOS2P35228 1153 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 EIF6P56537 245 aaKnown RBP8.99□□□□□ -0.97
SMC4-217ENST00000485867 CLDN10P78369 228 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 USP17L2Q6R6M4 530 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 USP50Q70EL3 339 aaPredicted RBP8.99□□□□□ -0.97
SMC4-217ENST00000485867 USP17L1Q7RTZ2 530 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 JDP2Q8WYK2 163 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 SUV39H2Q9H5I1 410 aa8.99□□□□□ -0.97
SMC4-217ENST00000485867 IL6STP40189 918 aaPredicted RBP8.98□□□□□ -0.97
SMC4-217ENST00000485867 NOGQ13253 232 aa8.98□□□□□ -0.97
SMC4-217ENST00000485867 TBCELQ5QJ74 424 aa8.98□□□□□ -0.97
SMC4-217ENST00000485867 HDGFL1Q5TGJ6 251 aa8.98□□□□□ -0.97
SMC4-217ENST00000485867 ZNF468Q5VIY5 522 aaPredicted RBP8.98□□□□□ -0.97
SMC4-217ENST00000485867 TPCN2Q8NHX9 752 aa8.98□□□□□ -0.97
SMC4-217ENST00000485867 PSMD1Q99460 953 aa8.98□□□□□ -0.97
SMC4-217ENST00000485867 POLR2AP24928 1970 aaKnown RBP8.98□□□□□ -0.97
SMC4-217ENST00000485867 HEG1Q9ULI3 1381 aa8.98□□□□□ -0.97
SMC4-217ENST00000485867 GNB5O14775 395 aa8.97□□□□□ -0.97
SMC4-217ENST00000485867 LAMC2Q13753 1193 aa8.97□□□□□ -0.97
SMC4-217ENST00000485867 CHSY3Q70JA7 882 aa8.97□□□□□ -0.97
SMC4-217ENST00000485867 NBPF5PQ86XG9 351 aaPredicted RBP8.97□□□□□ -0.97
SMC4-217ENST00000485867 GCC1Q96CN9 775 aa8.97□□□□□ -0.97
SMC4-217ENST00000485867 GLIS2Q9BZE0 524 aaPredicted RBP8.97□□□□□ -0.97
SMC4-217ENST00000485867 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
SMC4-217ENST00000485867 ATP9BO43861 1147 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 ATP1A2P50993 1020 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 GRIN2CQ14957 1233 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 SH3PXD2AQ5TCZ1 1133 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 CCDC102BQ68D86 513 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 TTC5Q8N0Z6 440 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 ZNF496Q96IT1 587 aaPredicted RBP8.96□□□□□ -0.98
SMC4-217ENST00000485867 SAGE1Q9NXZ1 904 aa8.96□□□□□ -0.98
SMC4-217ENST00000485867 GPC6Q9Y625 555 aaPredicted RBP8.96□□□□□ -0.98
SMC4-217ENST00000485867 SERTM1A2A2V5 107 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 PIK3R2O00459 728 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 A1BGP04217 495 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 PCBP4P57723 403 aaKnown RBP8.95□□□□□ -0.98
SMC4-217ENST00000485867 HABP4Q5JVS0 413 aaKnown RBP8.95□□□□□ -0.98
SMC4-217ENST00000485867 LRRC69Q6ZNQ3 347 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 ZNF408Q9H9D4 720 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 ADARB2Q9NS39 739 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms