RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.22□□□□□ -0.13
HPS4-214ENST00000485842 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
HPS4-214ENST00000485842 DDRGK1Q96HY6 314 aa14.22□□□□□ -0.13
HPS4-214ENST00000485842 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
HPS4-214ENST00000485842 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
HPS4-214ENST00000485842 PI4KBQ9UBF8 816 aa14.22□□□□□ -0.13
HPS4-214ENST00000485842 DOCK1Q14185 1865 aa14.22□□□□□ -0.13
HPS4-214ENST00000485842 FAM155AB1AL88 458 aaPredicted RBP14.21□□□□□ -0.13
HPS4-214ENST00000485842 APPP05067 770 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 CYP2D6P10635 497 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 SDSP20132 328 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 NOGQ13253 232 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 TTC6Q86TZ1 520 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 ZIC5Q96T25 663 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 HERC5Q9UII4 1024 aaKnown RBP14.21□□□□□ -0.13
HPS4-214ENST00000485842 SNCAIPQ9Y6H5 919 aa14.21□□□□□ -0.13
HPS4-214ENST00000485842 ATAD5Q96QE3 1844 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 UNCXA6NJT0 531 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 GNAT2P19087 354 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 EVX2Q03828 476 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 AMOTL1Q8IY63 956 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 WNK4Q96J92 1243 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
HPS4-214ENST00000485842 LAMB1P07942 1786 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 CYP2D7A0A087X1C5 515 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 HIP1O00291 1037 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 TBC1D12O60347 775 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 TDO2P48775 406 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 PLCD1P51178 756 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 KIF23Q02241 960 aaPredicted RBP14.19□□□□□ -0.14
HPS4-214ENST00000485842 MAP3K10Q02779 954 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 FOXP4Q8IVH2 680 aaPredicted RBP14.19□□□□□ -0.14
HPS4-214ENST00000485842 OPTNQ96CV9 577 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 EPB41L4AQ9HCS5 686 aaPredicted RBP14.19□□□□□ -0.14
HPS4-214ENST00000485842 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
HPS4-214ENST00000485842 MYH8P13535 1937 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 SPDYE5A6NIY4 337 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 USP17L21D6R901 530 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 GJA5P36382 358 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 NOL9Q5SY16 702 aaKnown RBP14.18□□□□□ -0.14
HPS4-214ENST00000485842 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
HPS4-214ENST00000485842 ZNF589Q86UQ0 364 aaPredicted RBP14.18□□□□□ -0.14
HPS4-214ENST00000485842 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 JMYQ8N9B5 988 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 EHD4Q9H223 541 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 PICK1Q9NRD5 415 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.18□□□□□ -0.14
HPS4-214ENST00000485842 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
HPS4-214ENST00000485842 CEP350Q5VT06 3117 aa14.18□□□□□ -0.14
HPS4-214ENST00000485842 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 CTNND1O60716 968 aaKnown RBP14.17□□□□□ -0.14
HPS4-214ENST00000485842 GDF11O95390 407 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
HPS4-214ENST00000485842 MAP2K2P36507 400 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
HPS4-214ENST00000485842 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
HPS4-214ENST00000485842 ERO1BQ86YB8 467 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 IFNL3Q8IZI9 196 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 NAPBQ9H115 298 aa14.17□□□□□ -0.14
HPS4-214ENST00000485842 MINDY4BA8MYZ0 360 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
HPS4-214ENST00000485842 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 CAP2P40123 477 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
HPS4-214ENST00000485842 C12orf60Q5U649 245 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 VPS53Q5VIR6 699 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
HPS4-214ENST00000485842 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
HPS4-214ENST00000485842 FOXP2O15409 715 aa14.15□□□□□ -0.14
HPS4-214ENST00000485842 SHMT1P34896 483 aa14.15□□□□□ -0.14
HPS4-214ENST00000485842 MFAP1P55081 439 aaKnown RBP14.15□□□□□ -0.14
HPS4-214ENST00000485842 MAP2K1Q02750 393 aaPredicted RBP14.15□□□□□ -0.14
HPS4-214ENST00000485842 GABPAQ06546 454 aa14.15□□□□□ -0.14
HPS4-214ENST00000485842 PPIL2Q13356 520 aa14.15□□□□□ -0.14
HPS4-214ENST00000485842 PHIPQ8WWQ0 1821 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 MANSC4A6NHS7 340 aaPredicted RBP14.14□□□□□ -0.15
HPS4-214ENST00000485842 IRF6O14896 467 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 PTPRAP18433 802 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 CHMLP26374 656 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 PPATQ06203 517 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 SREBF2Q12772 1141 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 CERKLQ49MI3 558 aaPredicted RBP14.14□□□□□ -0.15
HPS4-214ENST00000485842 SBK1Q52WX2 424 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 588.7 ms