RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 HERC5Q9UII4 1024 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 PCNTO95613 3336 aa16.35■□□□□ 0.21
SOX2-OT-209ENST00000485035 SIPA1L1O43166 1804 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 FOXN1O15353 648 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 NEFLP07196 543 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 EVX2Q03828 476 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
SOX2-OT-209ENST00000485035 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 GPAA1O43292 621 aa16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 PLCD1P51178 756 aa16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 FOXP4Q8IVH2 680 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-209ENST00000485035 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 CYP2D6P10635 497 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 PTPRAP18433 802 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 TM4SF4P48230 202 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 PPATQ06203 517 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 PPIL2Q13356 520 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 EHD4Q9H223 541 aa16.32■□□□□ 0.2
SOX2-OT-209ENST00000485035 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 IRF6O14896 467 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 JAG1P78504 1218 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 SERPINB13Q9UIV8 391 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 MYH7P12883 1935 aa16.31■□□□□ 0.2
SOX2-OT-209ENST00000485035 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 CAP2P40123 477 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 GABPAQ06546 454 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 CCDC129Q6ZRS4 1044 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 FAM227BQ96M60 508 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 PTPN18Q99952 460 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 NAV1Q8NEY1 1877 aa16.3■□□□□ 0.2
SOX2-OT-209ENST00000485035 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 IGF2BP3O00425 579 aaKnown RBP eCLIP16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 CA12O43570 354 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 TRPA1O75762 1119 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 SHMT1P34896 483 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 GTF2A2P52657 109 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 INHBEP58166 350 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 IFNL1Q8IU54 200 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 KCNH4Q9UQ05 1017 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
SOX2-OT-209ENST00000485035 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 FOXP2O15409 715 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 GDF11O95390 407 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 GNAT2P19087 354 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 SDSP20132 328 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 CCL15Q16663 113 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 SLC44A5Q8NCS7 719 aa16.28■□□□□ 0.2
SOX2-OT-209ENST00000485035 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms