RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 OGFRQ9NZT2 677 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 TACC3Q9Y6A5 838 aa22.63■■□□□ 1.21
LIMS2-215ENST00000484252 KDM4FA0A1W2PPD8 638 aa22.62■■□□□ 1.21
LIMS2-215ENST00000484252 SLU7O95391 586 aaKnown RBP22.62■■□□□ 1.21
LIMS2-215ENST00000484252 DIS3L2Q8IYB7 885 aaKnown RBP22.62■■□□□ 1.21
LIMS2-215ENST00000484252 ZNF215Q9UL58 517 aaPredicted RBP22.62■■□□□ 1.21
LIMS2-215ENST00000484252 ATP1A3P13637 1013 aa22.62■■□□□ 1.21
LIMS2-215ENST00000484252 IGHMBP2P38935 993 aaKnown RBP22.62■■□□□ 1.21
LIMS2-215ENST00000484252 LCORLQ8N3X6 602 aa22.62■■□□□ 1.21
LIMS2-215ENST00000484252 ZNF579Q8NAF0 562 aaKnown RBP22.62■■□□□ 1.21
LIMS2-215ENST00000484252 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
LIMS2-215ENST00000484252 BCORQ6W2J9 1755 aa22.62■■□□□ 1.21
LIMS2-215ENST00000484252 BTBD18B2RXH4 712 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 PTPREP23469 700 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 PPP2R5BQ15173 497 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 STK11IPQ8N1F8 1099 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 CEP131Q9UPN4 1083 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 PCDHA5Q9Y5H7 936 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 MDM2Q00987 491 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-215ENST00000484252 CRACR2BQ8N4Y2 399 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-215ENST00000484252 ZNF397Q8NF99 534 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-215ENST00000484252 L2HGDHQ9H9P8 463 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 DACH1Q9UI36 760 aa22.61■■□□□ 1.21
LIMS2-215ENST00000484252 PRKAB2O43741 272 aa22.6■■□□□ 1.21
LIMS2-215ENST00000484252 TOB1P50616 345 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-215ENST00000484252 CFAP100Q494V2 611 aa22.6■■□□□ 1.21
LIMS2-215ENST00000484252 RRP12Q5JTH9 1297 aaKnown RBP22.6■■□□□ 1.21
LIMS2-215ENST00000484252 TAF3Q5VWG9 929 aa22.6■■□□□ 1.21
LIMS2-215ENST00000484252 VSTM4Q8IW00 320 aa22.6■■□□□ 1.21
LIMS2-215ENST00000484252 FBXO2Q9UK22 296 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-215ENST00000484252 MORC2Q9Y6X9 1032 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-215ENST00000484252 GUCY1A2P33402 732 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 NAA30Q147X3 362 aaPredicted RBP22.59■■□□□ 1.21
LIMS2-215ENST00000484252 FCHSD1Q86WN1 690 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 FOXP4Q8IVH2 680 aaPredicted RBP22.59■■□□□ 1.21
LIMS2-215ENST00000484252 TOMM22Q9NS69 142 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 NT5DC1Q5TFE4 455 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 KANK3Q6NY19 840 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 TMX1Q9H3N1 280 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 SEC31BQ9NQW1 1179 aa22.59■■□□□ 1.21
LIMS2-215ENST00000484252 SPDYE4A6NLX3 237 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 UBE2Q2LH0YL09 131 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 BCAMP50895 628 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 POSTNQ15063 836 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 INTS5Q6P9B9 1019 aaKnown RBP22.58■■□□□ 1.21
LIMS2-215ENST00000484252 TRIML1Q8N9V2 468 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 MLKLQ8NB16 471 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 FANCBQ8NB91 859 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 LRP2BPQ9P2M1 347 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 ANAPC4Q9UJX5 808 aa22.58■■□□□ 1.21
LIMS2-215ENST00000484252 TOP1P11387 765 aaKnown RBP22.58■■□□□ 1.2
LIMS2-215ENST00000484252 PPARAQ07869 468 aa22.58■■□□□ 1.2
LIMS2-215ENST00000484252 ZNF654Q8IZM8 581 aa22.58■■□□□ 1.2
LIMS2-215ENST00000484252 DPF2Q92785 391 aa22.58■■□□□ 1.2
LIMS2-215ENST00000484252 UBAC1Q9BSL1 405 aa22.58■■□□□ 1.2
LIMS2-215ENST00000484252 FANCLQ9NW38 375 aa22.58■■□□□ 1.2
LIMS2-215ENST00000484252 DDX41Q9UJV9 622 aaKnown RBP22.58■■□□□ 1.2
LIMS2-215ENST00000484252 KCNJ14Q9UNX9 436 aa22.58■■□□□ 1.2
LIMS2-215ENST00000484252 MAN1B1Q9UKM7 699 aa22.57■■□□□ 1.2
LIMS2-215ENST00000484252 SRPRBQ9Y5M8 271 aaKnown RBP22.57■■□□□ 1.2
LIMS2-215ENST00000484252 SNAP23O00161 211 aa22.56■■□□□ 1.2
LIMS2-215ENST00000484252 LAMB2P55268 1798 aa22.56■■□□□ 1.2
LIMS2-215ENST00000484252 ZKSCAN3Q9BRR0 538 aa22.56■■□□□ 1.2
LIMS2-215ENST00000484252 RNF26Q9BY78 433 aaPredicted RBP22.56■■□□□ 1.2
LIMS2-215ENST00000484252 PHLPP2Q6ZVD8 1323 aa22.56■■□□□ 1.2
LIMS2-215ENST00000484252 SARSP49591 514 aaKnown RBP22.56■■□□□ 1.2
LIMS2-215ENST00000484252 SYT10Q6XYQ8 523 aa22.56■■□□□ 1.2
LIMS2-215ENST00000484252 ESR2Q92731 530 aa22.56■■□□□ 1.2
LIMS2-215ENST00000484252 CDC5LQ99459 802 aaKnown RBP22.56■■□□□ 1.2
LIMS2-215ENST00000484252 WNK3Q9BYP7 1800 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 PHLPP1O60346 1717 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 DOT1LQ8TEK3 1739 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 CAMTA2O94983 1202 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 XBP1P17861 261 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 BMP6P22004 513 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 ETF1P62495 437 aaKnown RBP22.55■■□□□ 1.2
LIMS2-215ENST00000484252 CCDC93Q567U6 631 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 ENOX1Q8TC92 643 aaKnown RBP22.55■■□□□ 1.2
LIMS2-215ENST00000484252 SMARCE1Q969G3 411 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 CCDC34Q96HJ3 373 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 RREB1Q92766 1687 aa22.55■■□□□ 1.2
LIMS2-215ENST00000484252 CYP7A1P22680 504 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 CHRNDQ07001 517 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 CDCA7Q9BWT1 371 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-215ENST00000484252 POLR2DO15514 142 aaKnown RBP22.54■■□□□ 1.2
LIMS2-215ENST00000484252 NTSR2O95665 410 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 PDE4BQ07343 736 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 MORC3Q14149 939 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 CT47A1Q5JQC4 288 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-215ENST00000484252 HOMER1Q86YM7 354 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 MIGA1Q8NAN2 632 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 SERTAD1Q9UHV2 236 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 BCL9LQ86UU0 1499 aa22.54■■□□□ 1.2
LIMS2-215ENST00000484252 A0A0U1RQG5 324 aaPredicted RBP22.53■■□□□ 1.2
LIMS2-215ENST00000484252 ZSCAN12O43309 604 aa22.53■■□□□ 1.2
LIMS2-215ENST00000484252 CRKLP46109 303 aaKnown RBP22.53■■□□□ 1.2
LIMS2-215ENST00000484252 AKAP17AQ02040 695 aaKnown RBP22.53■■□□□ 1.2
LIMS2-215ENST00000484252 SEC23AQ15436 765 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms