RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
COL8A1-207ENST00000483969 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-207ENST00000483969 ATF7IPQ6VMQ6 1270 aa11.18□□□□□ -0.62
COL8A1-207ENST00000483969 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
COL8A1-207ENST00000483969 UTYO14607 1347 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 AFDNP55196 1824 aaKnown RBP11.17□□□□□ -0.62
COL8A1-207ENST00000483969 ANKRD18BA2A2Z9 1011 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 SPATA31C2B4DYI2 1134 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 TRAK2O60296 914 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 CELA2BP08218 269 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-207ENST00000483969 IGHMBP2P38935 993 aaKnown RBP11.17□□□□□ -0.62
COL8A1-207ENST00000483969 FOXO4P98177 505 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 IFIT5Q13325 482 aaKnown RBP11.17□□□□□ -0.62
COL8A1-207ENST00000483969 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
COL8A1-207ENST00000483969 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 TRERF1Q96PN7 1200 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 GRIP2Q9C0E4 1043 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 USP44Q9H0E7 712 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 OSBPL3Q9H4L5 887 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 GREM2Q9H772 168 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 ARHGEF10LQ9HCE6 1279 aa11.17□□□□□ -0.62
COL8A1-207ENST00000483969 NSFL1CQ9UNZ2 370 aaKnown RBP11.17□□□□□ -0.62
COL8A1-207ENST00000483969 NUP98P52948 1817 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 NBPF7P0C2Y1 421 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-207ENST00000483969 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
COL8A1-207ENST00000483969 POU4F2Q12837 409 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 DBN1Q16643 649 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 JDP2Q8WYK2 163 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
COL8A1-207ENST00000483969 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 ZNF277Q9NRM2 450 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-207ENST00000483969 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-207ENST00000483969 CHMP3Q9Y3E7 222 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-207ENST00000483969 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
COL8A1-207ENST00000483969 KIAA1551Q9HCM1 1747 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 GNAI3P08754 354 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-207ENST00000483969 TRIM27P14373 513 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 SUCLG2Q96I99 432 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 GAS2L1Q99501 681 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-207ENST00000483969 EYA3Q99504 573 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 RTFDC1Q9BY42 306 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-207ENST00000483969 ANKIB1Q9P2G1 1089 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.62
COL8A1-207ENST00000483969 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 GPR25O00155 361 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 GNRH1P01148 92 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 PRELPP51888 382 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 FOXK2Q01167 660 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 TAS1R3Q7RTX0 852 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
COL8A1-207ENST00000483969 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
COL8A1-207ENST00000483969 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-207ENST00000483969 GTPBP3Q969Y2 492 aaKnown RBP11.14□□□□□ -0.63
COL8A1-207ENST00000483969 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
COL8A1-207ENST00000483969 LOC100996750A0A140TA64 210 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 PPIP5K2O43314 1243 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 MYCP01106 439 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-207ENST00000483969 IGHA1P01876 353 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 GPSM2P81274 684 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 WASHC4Q2M389 1173 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 RABL6Q3YEC7 729 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-207ENST00000483969 KAZALD1Q96I82 304 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 KRTAP4-6Q9BYQ5 205 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
COL8A1-207ENST00000483969 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
COL8A1-207ENST00000483969 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
COL8A1-207ENST00000483969 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
COL8A1-207ENST00000483969 SUZ12Q15022 739 aaKnown RBP11.12□□□□□ -0.63
COL8A1-207ENST00000483969 LDHAL6AQ6ZMR3 332 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 NIM1KQ8IY84 436 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-207ENST00000483969 CNNM1Q9NRU3 951 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 ARFGEF2Q9Y6D5 1785 aa11.12□□□□□ -0.63
COL8A1-207ENST00000483969 XDHP47989 1333 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 FZD9O00144 591 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 F11P03951 625 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 KIAA2012Q0VF49 1180 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 AOC3Q16853 763 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 TMEM57Q8N5G2 664 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
COL8A1-207ENST00000483969 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
COL8A1-207ENST00000483969 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
COL8A1-207ENST00000483969 PHF20L1A8MW92 1017 aa11.1□□□□□ -0.63
COL8A1-207ENST00000483969 UFL1O94874 794 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms