RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 BTDP43251 543 aa13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 HMGCS2P54868 508 aa13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 PROCA1Q8NCQ7 364 aaPredicted RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 GUCD1Q96NT3 240 aa13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 ASCC2Q9H1I8 757 aaPredicted RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 DENND2AQ9ULE3 1009 aa13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 SPTBN5Q9NRC6 3674 aaKnown RBP13.57□□□□□ -0.24
SMARCC1-205ENST00000483847 COL6A1P12109 1028 aa13.56□□□□□ -0.24
SMARCC1-205ENST00000483847 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
SMARCC1-205ENST00000483847 CYP2B6P20813 491 aa13.56□□□□□ -0.24
SMARCC1-205ENST00000483847 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
SMARCC1-205ENST00000483847 DZIP1Q86YF9 867 aaKnown RBP13.56□□□□□ -0.24
SMARCC1-205ENST00000483847 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
SMARCC1-205ENST00000483847 SEMA3EO15041 775 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 RHBDL3P58872 404 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 RASGRF1Q13972 1273 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 ZNF280CQ8ND82 737 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 ZNF384Q8TF68 577 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 MORF4L1Q9UBU8 362 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 ABCF2Q9UG63 623 aa13.55□□□□□ -0.24
SMARCC1-205ENST00000483847 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 TBC1D12O60347 775 aa13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 FAM161BQ96MY7 647 aa13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 COL2A1P02458 1487 aaPredicted RBP13.54□□□□□ -0.24
SMARCC1-205ENST00000483847 CIAO1O76071 339 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 CCND3P30281 292 aaPredicted RBP13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 CAP2P40123 477 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 MECOMQ03112 1051 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 LHX8Q68G74 356 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 OSBPL5Q9H0X9 879 aaPredicted RBP13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 TXNRD2Q9NNW7 524 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 PTPRCP08575 1304 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 PRUNE2Q8WUY3 3088 aa13.53□□□□□ -0.24
SMARCC1-205ENST00000483847 GPR75-ASB3A0A0A6YYF3 556 aa13.52□□□□□ -0.25
SMARCC1-205ENST00000483847 CCL14Q16627 93 aa13.52□□□□□ -0.25
SMARCC1-205ENST00000483847 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
SMARCC1-205ENST00000483847 P2RX7Q99572 595 aaKnown RBP13.52□□□□□ -0.25
SMARCC1-205ENST00000483847 SIPA1L1O43166 1804 aa13.52□□□□□ -0.25
SMARCC1-205ENST00000483847 FRMPD3Q5JV73 1810 aa13.52□□□□□ -0.25
SMARCC1-205ENST00000483847 MAST2Q6P0Q8 1798 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 USP17L5A8MUK1 530 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 ZBTB22O15209 634 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 TIMM10P62072 90 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 JAG1P78504 1218 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 MTMR2Q13614 643 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 USP6NLQ92738 828 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 NUDT12Q9BQG2 462 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 PORCNQ9H237 461 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
SMARCC1-205ENST00000483847 PDS5AQ29RF7 1337 aaKnown RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 IL15P40933 162 aaPredicted RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 HERVK_113P62684 666 aa13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 IRX3P78415 501 aaPredicted RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 POTEEQ6S8J3 1075 aa13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 GPRC5AQ8NFJ5 357 aa13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 SOCS4Q8WXH5 440 aa13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 RBPJLQ9UBG7 517 aa13.5□□□□□ -0.25
SMARCC1-205ENST00000483847 Q3C1V9 767 aa13.49□□□□□ -0.25
SMARCC1-205ENST00000483847 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
SMARCC1-205ENST00000483847 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
SMARCC1-205ENST00000483847 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
SMARCC1-205ENST00000483847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
SMARCC1-205ENST00000483847 TTC28Q96AY4 2481 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 UBTFL1P0CB47 393 aaPredicted RBP13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 BACE1P56817 501 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 MORN1Q5T089 497 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 TBC1D9Q6ZT07 1266 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 NSUN4Q96CB9 384 aaKnown RBP13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 XAGE2Q96GT9 111 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 AS3MTQ9HBK9 375 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
SMARCC1-205ENST00000483847 LTBP2Q14767 1821 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms