RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 API5Q9BZZ5 524 aaKnown RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 MCOLN1Q9GZU1 580 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 DEFB129Q9H1M3 183 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 SMC4Q9NTJ3 1288 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 BRCA2P51587 3418 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 MKI67P46013 3256 aaKnown RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 ASTN2O75129 1339 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 PDS5AQ29RF7 1337 aaKnown RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 MGAMO43451 1857 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 CDK5RAP2Q96SN8 1893 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 LOC285556D6RIA3 1793 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 WDHD1O75717 1129 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 CIAO1O76071 339 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 IFIT1P09914 478 aaKnown RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 SLC5A1P13866 664 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 HIBADHP31937 336 aaKnown RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 TM4SF4P48230 202 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 RPIAP49247 311 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 MLLT1Q03111 559 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 CFAP100Q494V2 611 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 METTL24Q5JXM2 366 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 LDLRAD1Q5T700 205 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 TRIM67Q6ZTA4 783 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 PARP9Q8IXQ6 854 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 ANKRD13AQ8IZ07 590 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 CERS5Q8N5B7 392 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 VGLL2Q8N8G2 317 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 TDRD7Q8NHU6 1098 aaKnown RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 SPIRE2Q8WWL2 714 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 TEKT1Q969V4 418 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 SUCLG2Q96I99 432 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 BICC1Q9H694 974 aaKnown RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 ZCCHC17Q9NP64 241 aaKnown RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 RNF186Q9NXI6 227 aa5.17□□□□□ -1.58
VPS13D-208ENST00000481484 TTF2Q9UNY4 1162 aaKnown RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 COL2A1P02458 1487 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-208ENST00000481484 CCDC85CA6NKD9 419 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 IGSF3O75054 1194 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 FRAT2O75474 233 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 TAF5LO75529 589 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 TRPA1O75762 1119 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PDE8BO95263 885 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 UBTFL1P0CB47 393 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PRR20EP86478 221 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PRR20CP86479 221 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PRR20DP86480 221 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PRR20BP86481 221 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PRR20AP86496 221 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 SLFN5Q08AF3 891 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 ARHGEF6Q15052 776 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 EPHA10Q5JZY3 1008 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 DCAF15Q66K64 600 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 FBXO46Q6PJ61 603 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 Q6ZNB5 142 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 FAM83AQ86UY5 434 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 ZGPATQ8N5A5 531 aaKnown RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 ANKRD44Q8N8A2 993 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 WDR66Q8TBY9 1149 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 SSH1Q8WYL5 1049 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 LPIN2Q92539 896 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 ERO1AQ96HE7 468 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 WNK4Q96J92 1243 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 CSRNP1Q96S65 589 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 MRIQ9BWK5 157 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 VEZTQ9HBM0 779 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PRDM9Q9NQV7 894 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 GNL3LQ9NVN8 582 aaKnown RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PCDHGC3Q9UN70 934 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 ANGEL1Q9UNK9 670 aaKnown RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 FCF1Q9Y324 198 aaKnown RBP5.16□□□□□ -1.58
VPS13D-208ENST00000481484 RIPOR2Q9Y4F9 1068 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 CSADQ9Y600 493 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 MYH8P13535 1937 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 TRIOBPQ9H2D6 2365 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 SALL1Q9NSC2 1324 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 PHIPQ8WWQ0 1821 aa5.16□□□□□ -1.58
VPS13D-208ENST00000481484 MYH7P12883 1935 aa5.15□□□□□ -1.58
VPS13D-208ENST00000481484 UBE2Q2LH0YL09 131 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 EYA2O00167 538 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 LCE2BO14633 110 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 GDF9O60383 454 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 FKTNO75072 461 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 DXOO77932 396 aaKnown RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 GNAI3P08754 354 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 NBPF7P0C2Y1 421 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 MS4A1P11836 297 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 CRKP46108 304 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 RBM5P52756 815 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 GUCA2AQ02747 115 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 PTPN12Q05209 780 aaKnown RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF697Q5TEC3 545 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 HHIPL2Q6UWX4 724 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 FBXO33Q7Z6M2 555 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 HELBQ8NG08 1087 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 ARHGAP45Q92619 1136 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 KAZALD1Q96I82 304 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF594Q96JF6 807 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 FAM84BQ96KN1 310 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 ZDHHC15Q96MV8 337 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 ZIC5Q96T25 663 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms