RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 NMIQ13287 307 aaPredicted RBP24.45■■□□□ 1.5
CTSA-206ENST00000480961 SNCAIPQ9Y6H5 919 aa24.45■■□□□ 1.5
CTSA-206ENST00000480961 COL2A1P02458 1487 aaPredicted RBP24.45■■□□□ 1.5
CTSA-206ENST00000480961 CYP2D7A0A087X1C5 515 aa24.44■■□□□ 1.5
CTSA-206ENST00000480961 A0A0D9SFI3 127 aa24.44■■□□□ 1.5
CTSA-206ENST00000480961 GJA5P36382 358 aa24.44■■□□□ 1.5
CTSA-206ENST00000480961 KIF23Q02241 960 aaPredicted RBP24.44■■□□□ 1.5
CTSA-206ENST00000480961 RRP1BQ14684 758 aaKnown RBP24.44■■□□□ 1.5
CTSA-206ENST00000480961 CRACR2BQ8N4Y2 399 aaPredicted RBP24.44■■□□□ 1.5
CTSA-206ENST00000480961 ATP8A2Q9NTI2 1148 aa24.44■■□□□ 1.5
CTSA-206ENST00000480961 GSG1L2A8MUP6 293 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 SMIM22K7EJ46 135 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 TBC1D12O60347 775 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 APPP05067 770 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 NOGQ13253 232 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 SPRYD7Q5W111 196 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 FOXP4Q8IVH2 680 aaPredicted RBP24.43■■□□□ 1.5
CTSA-206ENST00000480961 WNK4Q96J92 1243 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 TRIM34Q9BYJ4 488 aa24.43■■□□□ 1.5
CTSA-206ENST00000480961 UNCXA6NJT0 531 aa24.42■■□□□ 1.5
CTSA-206ENST00000480961 TTC6Q86TZ1 520 aa24.42■■□□□ 1.5
CTSA-206ENST00000480961 JMYQ8N9B5 988 aa24.42■■□□□ 1.5
CTSA-206ENST00000480961 OPTNQ96CV9 577 aa24.42■■□□□ 1.5
CTSA-206ENST00000480961 DNAJC18Q9H819 358 aa24.42■■□□□ 1.5
CTSA-206ENST00000480961 HELLSQ9NRZ9 838 aa24.42■■□□□ 1.5
CTSA-206ENST00000480961 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.42■■□□□ 1.5
CTSA-206ENST00000480961 USP17L12C9JPN9 530 aa24.41■■□□□ 1.5
CTSA-206ENST00000480961 USP17L21D6R901 530 aa24.41■■□□□ 1.5
CTSA-206ENST00000480961 OTUD5Q96G74 571 aa24.41■■□□□ 1.5
CTSA-206ENST00000480961 HERC5Q9UII4 1024 aaKnown RBP24.41■■□□□ 1.5
CTSA-206ENST00000480961 PATL2C9JE40 543 aaKnown RBP24.4■■□□□ 1.5
CTSA-206ENST00000480961 MAP2K2P36507 400 aa24.4■■□□□ 1.5
CTSA-206ENST00000480961 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
CTSA-206ENST00000480961 CTR9Q6PD62 1173 aa24.4■■□□□ 1.5
CTSA-206ENST00000480961 CWC27Q6UX04 472 aaKnown RBP24.4■■□□□ 1.5
CTSA-206ENST00000480961 METTL16Q86W50 562 aaKnown RBP24.4■■□□□ 1.5
CTSA-206ENST00000480961 DDRGK1Q96HY6 314 aa24.4■■□□□ 1.5
CTSA-206ENST00000480961 EPB41L4AQ9HCS5 686 aaPredicted RBP24.4■■□□□ 1.5
CTSA-206ENST00000480961 DIAPH3Q9NSV4 1193 aa24.4■■□□□ 1.5
CTSA-206ENST00000480961 AK9Q5TCS8 1911 aa24.39■■□□□ 1.5
CTSA-206ENST00000480961 GNAT2P19087 354 aa24.39■■□□□ 1.49
CTSA-206ENST00000480961 JAG1P78504 1218 aa24.39■■□□□ 1.49
CTSA-206ENST00000480961 SHROOM1Q2M3G4 852 aaPredicted RBP24.39■■□□□ 1.49
CTSA-206ENST00000480961 VPS53Q5VIR6 699 aa24.39■■□□□ 1.49
CTSA-206ENST00000480961 ZNF589Q86UQ0 364 aaPredicted RBP24.39■■□□□ 1.49
CTSA-206ENST00000480961 CCDC84Q86UT8 332 aaPredicted RBP24.39■■□□□ 1.49
CTSA-206ENST00000480961 DYNLL2Q96FJ2 89 aa24.39■■□□□ 1.49
CTSA-206ENST00000480961 SERPINB13Q9UIV8 391 aa24.39■■□□□ 1.49
CTSA-206ENST00000480961 SCYL3Q8IZE3 742 aa24.38■■□□□ 1.49
CTSA-206ENST00000480961 IFNL3Q8IZI9 196 aa24.38■■□□□ 1.49
CTSA-206ENST00000480961 STK11IPQ8N1F8 1099 aa24.38■■□□□ 1.49
CTSA-206ENST00000480961 SPDYE5A6NIY4 337 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 MINDY4BA8MYZ0 360 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 FOXP2O15409 715 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 CTNND1O60716 968 aaKnown RBP24.37■■□□□ 1.49
CTSA-206ENST00000480961 GDF11O95390 407 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 TDO2P48775 406 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 NOL9Q5SY16 702 aaKnown RBP24.37■■□□□ 1.49
CTSA-206ENST00000480961 C12orf60Q5U649 245 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 TICAM2Q86XR7 235 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 ERO1BQ86YB8 467 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 SLC44A5Q8NCS7 719 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 EHD4Q9H223 541 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 PICK1Q9NRD5 415 aa24.37■■□□□ 1.49
CTSA-206ENST00000480961 MYH7P12883 1935 aa24.36■■□□□ 1.49
CTSA-206ENST00000480961 CDK5RAP2Q96SN8 1893 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 HIP1O00291 1037 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 ZBTB48P10074 688 aaPredicted RBP24.35■■□□□ 1.49
CTSA-206ENST00000480961 SHMT1P34896 483 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 CAP2P40123 477 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 GABPAQ06546 454 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 GIMAP6Q6P9H5 292 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 AMOTL1Q8IY63 956 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 ZHX2Q9Y6X8 837 aa24.35■■□□□ 1.49
CTSA-206ENST00000480961 IRF6O14896 467 aa24.34■■□□□ 1.49
CTSA-206ENST00000480961 PTPRAP18433 802 aa24.34■■□□□ 1.49
CTSA-206ENST00000480961 NACAP1Q9BZK3 213 aa24.34■■□□□ 1.49
CTSA-206ENST00000480961 CCDC171Q6TFL3 1326 aa24.34■■□□□ 1.49
CTSA-206ENST00000480961 CHMLP26374 656 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 MAP2K1Q02750 393 aaPredicted RBP24.33■■□□□ 1.49
CTSA-206ENST00000480961 PPATQ06203 517 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 PPIL2Q13356 520 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 SBK1Q52WX2 424 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 TATDN1Q6P1N9 297 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 NAPBQ9H115 298 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 IL25Q9H293 177 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 WBP1LQ9NX94 342 aa24.33■■□□□ 1.49
CTSA-206ENST00000480961 ARPP21Q9UBL0 812 aaPredicted RBP24.33■■□□□ 1.49
CTSA-206ENST00000480961 FOCADQ5VW36 1801 aa24.33■■□□□ 1.48
CTSA-206ENST00000480961 OTOFQ9HC10 1997 aa24.33■■□□□ 1.48
CTSA-206ENST00000480961 HSPA1AP0DMV8 641 aaKnown RBP24.32■■□□□ 1.48
CTSA-206ENST00000480961 HSPA1BP0DMV9 641 aaKnown RBP24.32■■□□□ 1.48
CTSA-206ENST00000480961 CERKLQ49MI3 558 aaPredicted RBP24.32■■□□□ 1.48
CTSA-206ENST00000480961 SIPA1L1O43166 1804 aa24.32■■□□□ 1.48
CTSA-206ENST00000480961 MANSC4A6NHS7 340 aaPredicted RBP24.31■■□□□ 1.48
CTSA-206ENST00000480961 GH2P01242 217 aa24.31■■□□□ 1.48
CTSA-206ENST00000480961 HSPD1P10809 573 aaKnown RBP24.31■■□□□ 1.48
CTSA-206ENST00000480961 CDK8P49336 464 aa24.31■■□□□ 1.48
CTSA-206ENST00000480961 MS4A4AQ96JQ5 239 aa24.31■■□□□ 1.48
CTSA-206ENST00000480961 C16orf86Q6ZW13 317 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms