RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 FOXP4Q8IVH2 680 aaPredicted RBP13.92□□□□□ -0.18
CCM2-213ENST00000480658 ZFPM1Q8IX07 1006 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 CCDC8Q9H0W5 538 aaPredicted RBP13.92□□□□□ -0.18
CCM2-213ENST00000480658 SNRKQ9NRH2 765 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 AFG3L2Q9Y4W6 797 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 CAPN2P17655 700 aa13.91□□□□□ -0.18
CCM2-213ENST00000480658 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
CCM2-213ENST00000480658 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
CCM2-213ENST00000480658 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
CCM2-213ENST00000480658 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCM2-213ENST00000480658 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 CYP7A1P22680 504 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 CAP2P40123 477 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 USP5P45974 858 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 FCGRTP55899 365 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 SOX10P56693 466 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 C17orf99Q6UX52 265 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 TTC6Q86TZ1 520 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 ZNF280CQ8ND82 737 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
CCM2-213ENST00000480658 GPATCH3Q96I76 525 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 EHD4Q9H223 541 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 AGTPBP1Q9UPW5 1226 aa13.9□□□□□ -0.18
CCM2-213ENST00000480658 RBBP6Q7Z6E9 1792 aaKnown RBP13.89□□□□□ -0.19
CCM2-213ENST00000480658 GADL1Q6ZQY3 521 aa13.89□□□□□ -0.19
CCM2-213ENST00000480658 METTL16Q86W50 562 aaKnown RBP13.89□□□□□ -0.19
CCM2-213ENST00000480658 MAGEB6Q8N7X4 407 aa13.89□□□□□ -0.19
CCM2-213ENST00000480658 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
CCM2-213ENST00000480658 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
CCM2-213ENST00000480658 LRRCC1Q9C099 1032 aa13.89□□□□□ -0.19
CCM2-213ENST00000480658 TLR7Q9NYK1 1049 aaKnown RBP13.89□□□□□ -0.19
CCM2-213ENST00000480658 TRIM75PA6NK02 468 aa13.88□□□□□ -0.19
CCM2-213ENST00000480658 C19orf81C9J6K1 198 aa13.88□□□□□ -0.19
CCM2-213ENST00000480658 GCLCP48506 637 aaPredicted RBP13.88□□□□□ -0.19
CCM2-213ENST00000480658 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
CCM2-213ENST00000480658 AMOTL1Q8IY63 956 aa13.88□□□□□ -0.19
CCM2-213ENST00000480658 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
CCM2-213ENST00000480658 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
CCM2-213ENST00000480658 PIH1D3Q9NQM4 214 aaKnown RBP13.88□□□□□ -0.19
CCM2-213ENST00000480658 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
CCM2-213ENST00000480658 LOC285556D6RIA3 1793 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
CCM2-213ENST00000480658 OSBPP22059 807 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
CCM2-213ENST00000480658 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 SERPINB13Q9UIV8 391 aa13.87□□□□□ -0.19
CCM2-213ENST00000480658 MAGEB6P1A0A0J9YX57 407 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 BCRP11274 1271 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 ATP5JP18859 108 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 PSMC4P43686 418 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 MOGSQ13724 837 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 FAM110CQ1W6H9 321 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 SLC9C2Q5TAH2 1124 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 GPAT2Q6NUI2 795 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 RAET1EQ8TD07 263 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 ZNF333Q96JL9 665 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 SRRDQ9UH36 339 aa13.86□□□□□ -0.19
CCM2-213ENST00000480658 ATAD5Q96QE3 1844 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 USP14P54578 494 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 BACE1P56817 501 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 UBXN2AP68543 259 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 SPP2Q13103 211 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 AAMPQ13685 434 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 DNAJC2Q99543 621 aaKnown RBP13.85□□□□□ -0.19
CCM2-213ENST00000480658 PAG1Q9NWQ8 432 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 CPA4Q9UI42 421 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 MYPNQ86TC9 1320 aa13.85□□□□□ -0.19
CCM2-213ENST00000480658 USP17L10C9JJH3 530 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 APBB1O00213 710 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 GOLIM4O00461 696 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 PDE6AP16499 860 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 SIRT2Q8IXJ6 389 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 MIGA1Q8NAN2 632 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 COA7Q96BR5 231 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 CABP5Q9NP86 173 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 PALD1Q9ULE6 856 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 PHIPQ8WWQ0 1821 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 PTPRFP10586 1907 aa13.84□□□□□ -0.19
CCM2-213ENST00000480658 CDK5RAP2Q96SN8 1893 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 CYP2C8P10632 490 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
CCM2-213ENST00000480658 HMGCS2P54868 508 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
CCM2-213ENST00000480658 SLC4A8Q2Y0W8 1093 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
CCM2-213ENST00000480658 TATDN1Q6P1N9 297 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 HAUS7Q99871 368 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms