RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 ZFYP08048 801 aaPredicted RBP14.54□□□□□ -0.08
CCM2-212ENST00000480382 MAP2K1Q02750 393 aaPredicted RBP14.54□□□□□ -0.08
CCM2-212ENST00000480382 LRRFIP1Q32MZ4 808 aaKnown RBP14.54□□□□□ -0.08
CCM2-212ENST00000480382 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
CCM2-212ENST00000480382 OPTNQ96CV9 577 aa14.54□□□□□ -0.08
CCM2-212ENST00000480382 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCM2-212ENST00000480382 TBC1D12O60347 775 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
CCM2-212ENST00000480382 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 RILPL2Q969X0 211 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 DNAJC18Q9H819 358 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 DCP1AQ9NPI6 582 aaPredicted RBP14.53□□□□□ -0.08
CCM2-212ENST00000480382 WBP1LQ9NX94 342 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 PI4KBQ9UBF8 816 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 HERC5Q9UII4 1024 aaKnown RBP14.53□□□□□ -0.08
CCM2-212ENST00000480382 PTPRFP10586 1907 aa14.53□□□□□ -0.08
CCM2-212ENST00000480382 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
CCM2-212ENST00000480382 NOL9Q5SY16 702 aaKnown RBP14.52□□□□□ -0.09
CCM2-212ENST00000480382 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.09
CCM2-212ENST00000480382 SCYL3Q8IZE3 742 aa14.52□□□□□ -0.09
CCM2-212ENST00000480382 CRACR2BQ8N4Y2 399 aaPredicted RBP14.52□□□□□ -0.09
CCM2-212ENST00000480382 SEC62Q99442 399 aaKnown RBP14.52□□□□□ -0.09
CCM2-212ENST00000480382 TRIM34Q9BYJ4 488 aa14.52□□□□□ -0.09
CCM2-212ENST00000480382 MCM9Q9NXL9 1143 aa14.52□□□□□ -0.09
CCM2-212ENST00000480382 SLC4A4Q9Y6R1 1079 aa14.52□□□□□ -0.09
CCM2-212ENST00000480382 FOXN1O15353 648 aa14.51□□□□□ -0.09
CCM2-212ENST00000480382 GPAA1O43292 621 aa14.51□□□□□ -0.09
CCM2-212ENST00000480382 EVX2Q03828 476 aa14.51□□□□□ -0.09
CCM2-212ENST00000480382 ZMYM1Q5SVZ6 1142 aa14.51□□□□□ -0.09
CCM2-212ENST00000480382 ERO1BQ86YB8 467 aa14.51□□□□□ -0.09
CCM2-212ENST00000480382 STRBPQ96SI9 672 aaKnown RBP14.51□□□□□ -0.09
CCM2-212ENST00000480382 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.51□□□□□ -0.09
CCM2-212ENST00000480382 POLR3DP05423 398 aaPredicted RBP14.5□□□□□ -0.09
CCM2-212ENST00000480382 CYP2D6P10635 497 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 GSPT1P15170 499 aaKnown RBP14.5□□□□□ -0.09
CCM2-212ENST00000480382 PLCD1P51178 756 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 SREBF2Q12772 1141 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 RRP1BQ14684 758 aaKnown RBP14.5□□□□□ -0.09
CCM2-212ENST00000480382 TTC22Q5TAA0 569 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 TTC6Q86TZ1 520 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
CCM2-212ENST00000480382 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 BEGAINQ9BUH8 593 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 ATP8A2Q9NTI2 1148 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 SERPINB13Q9UIV8 391 aa14.5□□□□□ -0.09
CCM2-212ENST00000480382 A0A0D9SFI3 127 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 MANSC4A6NHS7 340 aaPredicted RBP14.49□□□□□ -0.09
CCM2-212ENST00000480382 CTNND1O60716 968 aaKnown RBP14.49□□□□□ -0.09
CCM2-212ENST00000480382 PPATQ06203 517 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 PPIL2Q13356 520 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 CCDC84Q86UT8 332 aaPredicted RBP14.49□□□□□ -0.09
CCM2-212ENST00000480382 FOXP4Q8IVH2 680 aaPredicted RBP14.49□□□□□ -0.09
CCM2-212ENST00000480382 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
CCM2-212ENST00000480382 FAM227BQ96M60 508 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 EHD4Q9H223 541 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 PICK1Q9NRD5 415 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
CCM2-212ENST00000480382 LOC285556D6RIA3 1793 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 IRF6O14896 467 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 GDF11O95390 407 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 PTPRAP18433 802 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 CAP2P40123 477 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 TM4SF4P48230 202 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
CCM2-212ENST00000480382 SKAP1Q86WV1 359 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 DDRGK1Q96HY6 314 aa14.48□□□□□ -0.09
CCM2-212ENST00000480382 EPB41L4AQ9HCS5 686 aaPredicted RBP14.48□□□□□ -0.09
CCM2-212ENST00000480382 CYP2D7A0A087X1C5 515 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 CCL15-CCL14A0A0B4J2E2 113 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 HSPA8P11142 646 aaKnown RBP14.47□□□□□ -0.09
CCM2-212ENST00000480382 GNAT2P19087 354 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 SDSP20132 328 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 GTF2A2P52657 109 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
CCM2-212ENST00000480382 CCL15Q16663 113 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 CTR9Q6PD62 1173 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 MS4A4AQ96JQ5 239 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 RNF186Q9NXI6 227 aa14.47□□□□□ -0.09
CCM2-212ENST00000480382 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
CCM2-212ENST00000480382 USP17L12C9JPN9 530 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 USP17L21D6R901 530 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 SMIM22K7EJ46 135 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 IGF2BP3O00425 579 aaKnown RBP eCLIP14.46□□□□□ -0.09
CCM2-212ENST00000480382 CA12O43570 354 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 TRPA1O75762 1119 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 APPP05067 770 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 SHMT1P34896 483 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 TDO2P48775 406 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 JAG1P78504 1218 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 GABPAQ06546 454 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 TICAM2Q86XR7 235 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 IFNL1Q8IU54 200 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 AMOTL1Q8IY63 956 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 SLC44A5Q8NCS7 719 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 BRI3BPQ8WY22 251 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 DYNLL2Q96FJ2 89 aa14.46□□□□□ -0.09
CCM2-212ENST00000480382 HELLSQ9NRZ9 838 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms