RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 USP5P45974 858 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 ZSCAN23Q3MJ62 389 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 SLC51AQ86UW1 340 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 WASF1Q92558 559 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 ZNF622Q969S3 477 aaKnown RBP eCLIP11.49□□□□□ -0.571e-7■■■■□ 25.1
RAD51B-208ENST00000479335 C8orf76Q96K31 380 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 ZNF396Q96N95 335 aaPredicted RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 GDPD2Q9HCC8 539 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 JAG2Q9Y219 1238 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 LAMB1P07942 1786 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 ROBO3Q96MS0 1386 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 FIBPO43427 364 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 DTNBO60941 627 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 CALM1P0DP23 149 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 CALM2P0DP24 149 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 CALM3P0DP25 149 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 IARSP41252 1262 aaKnown RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 FKBP1AP62942 108 aaKnown RBP11.49□□□□□ -0.57
RAD51B-208ENST00000479335 GRIK5Q16478 980 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 MSL1Q68DK7 614 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 ZNF287Q9HBT7 754 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 MCM9Q9NXL9 1143 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 TMEM63CQ9P1W3 806 aa11.49□□□□□ -0.57
RAD51B-208ENST00000479335 RANBP6O60518 1105 aaKnown RBP11.48□□□□□ -0.57
RAD51B-208ENST00000479335 CDC27P30260 824 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 GTF2IP78347 998 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 SSRP1Q08945 709 aaKnown RBP11.48□□□□□ -0.57
RAD51B-208ENST00000479335 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 ZNF654Q8IZM8 581 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 SH3RF3Q8TEJ3 882 aaPredicted RBP11.48□□□□□ -0.57
RAD51B-208ENST00000479335 SPATA32Q96LK8 384 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 TNKSO95271 1327 aa11.48□□□□□ -0.57
RAD51B-208ENST00000479335 CYP2D7A0A087X1C5 515 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
RAD51B-208ENST00000479335 BTDP43251 543 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 RTN1Q16799 776 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 ENAHQ8N8S7 591 aaPredicted RBP11.47□□□□□ -0.57
RAD51B-208ENST00000479335 SUPT20HQ8NEM7 779 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 LEO1Q8WVC0 666 aaPredicted RBP11.47□□□□□ -0.57
RAD51B-208ENST00000479335 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 TCP11L1Q9NUJ3 509 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
RAD51B-208ENST00000479335 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
RAD51B-208ENST00000479335 G3V3G9 751 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 DDAH1O94760 285 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 RHBDL3P58872 404 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 CCDC183Q5T5S1 534 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.57
RAD51B-208ENST00000479335 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 LRSAM1Q6UWE0 723 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 CATIPQ7Z7H3 387 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 TEX11Q8IYF3 940 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 TGFBRAP1Q8WUH2 860 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 C7orf43Q8WVR3 580 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 MAP3K14Q99558 947 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 ZKSCAN3Q9BRR0 538 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 ALG1Q9BT22 464 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
RAD51B-208ENST00000479335 MYH15Q9Y2K3 1946 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 DEXIO95424 95 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 HDLBPQ00341 1268 aaKnown RBP11.46□□□□□ -0.58
RAD51B-208ENST00000479335 FAM173BQ6P4H8 233 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 DGKHQ86XP1 1220 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.58
RAD51B-208ENST00000479335 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.58
RAD51B-208ENST00000479335 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.58
RAD51B-208ENST00000479335 TFIP11Q9UBB9 837 aaKnown RBP11.46□□□□□ -0.58
RAD51B-208ENST00000479335 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
RAD51B-208ENST00000479335 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■■■■ 27.1
RAD51B-208ENST00000479335 TROAPQ12815 778 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 TRIM29Q14134 588 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 STK11IPQ8N1F8 1099 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
RAD51B-208ENST00000479335 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 SLX4Q8IY92 1834 aa11.45□□□□□ -0.58
RAD51B-208ENST00000479335 NAV1Q8NEY1 1877 aa11.44□□□□□ -0.58
RAD51B-208ENST00000479335 SMIM22K7EJ46 135 aa11.44□□□□□ -0.58
RAD51B-208ENST00000479335 PRDM1O75626 825 aa11.44□□□□□ -0.58
RAD51B-208ENST00000479335 CYP2D6P10635 497 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms