RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ERO1BQ86YB8 467 aa24.63■■□□□ 1.53
VARS-224ENST00000479051 ATP8A2Q9NTI2 1148 aa24.63■■□□□ 1.53
VARS-224ENST00000479051 SNCAIPQ9Y6H5 919 aa24.63■■□□□ 1.53
VARS-224ENST00000479051 MANSC4A6NHS7 340 aaPredicted RBP24.62■■□□□ 1.53
VARS-224ENST00000479051 SPDYE5A6NIY4 337 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 CA12O43570 354 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 AMOTL1Q8IY63 956 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 SDR42E1Q8WUS8 393 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 RILPL2Q969X0 211 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 CCDC136Q96JN2 1154 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 ZIC5Q96T25 663 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 PICK1Q9NRD5 415 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 MCM9Q9NXL9 1143 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 SLC4A4Q9Y6R1 1079 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 MYH1P12882 1939 aa24.62■■□□□ 1.53
VARS-224ENST00000479051 PHF20L1A8MW92 1017 aa24.61■■□□□ 1.53
VARS-224ENST00000479051 CTNND1O60716 968 aaKnown RBP24.61■■□□□ 1.53
VARS-224ENST00000479051 GNAT2P19087 354 aa24.61■■□□□ 1.53
VARS-224ENST00000479051 SCYL3Q8IZE3 742 aa24.61■■□□□ 1.53
VARS-224ENST00000479051 OSBP2Q969R2 916 aa24.61■■□□□ 1.53
VARS-224ENST00000479051 OTUD5Q96G74 571 aa24.61■■□□□ 1.53
VARS-224ENST00000479051 DCP1AQ9NPI6 582 aaPredicted RBP24.61■■□□□ 1.53
VARS-224ENST00000479051 NAV1Q8NEY1 1877 aa24.61■■□□□ 1.53
VARS-224ENST00000479051 INHBEP58166 350 aa24.6■■□□□ 1.53
VARS-224ENST00000479051 EHD4Q9H223 541 aa24.6■■□□□ 1.53
VARS-224ENST00000479051 FAM196BA6NMK8 535 aa24.59■■□□□ 1.53
VARS-224ENST00000479051 PDE4AP27815 886 aa24.59■■□□□ 1.53
VARS-224ENST00000479051 PPATQ06203 517 aa24.59■■□□□ 1.53
VARS-224ENST00000479051 SLC4A8Q2Y0W8 1093 aa24.59■■□□□ 1.53
VARS-224ENST00000479051 ZMYM1Q5SVZ6 1142 aa24.59■■□□□ 1.53
VARS-224ENST00000479051 METTL16Q86W50 562 aaKnown RBP24.59■■□□□ 1.53
VARS-224ENST00000479051 STRBPQ96SI9 672 aaKnown RBP24.59■■□□□ 1.53
VARS-224ENST00000479051 SERPINB13Q9UIV8 391 aa24.59■■□□□ 1.53
VARS-224ENST00000479051 GPAA1O43292 621 aa24.58■■□□□ 1.53
VARS-224ENST00000479051 PRKAB2O43741 272 aa24.58■■□□□ 1.53
VARS-224ENST00000479051 PPIL2Q13356 520 aa24.58■■□□□ 1.53
VARS-224ENST00000479051 M0R2C6 588 aa24.57■■□□□ 1.52
VARS-224ENST00000479051 SLURP2P0DP57 97 aa24.57■■□□□ 1.52
VARS-224ENST00000479051 GJA5P36382 358 aa24.57■■□□□ 1.52
VARS-224ENST00000479051 TM4SF4P48230 202 aa24.57■■□□□ 1.52
VARS-224ENST00000479051 GTF2A2P52657 109 aa24.57■■□□□ 1.52
VARS-224ENST00000479051 CNKSR2Q8WXI2 1034 aa24.57■■□□□ 1.52
VARS-224ENST00000479051 CTCFP49711 727 aaPredicted RBP24.56■■□□□ 1.52
VARS-224ENST00000479051 ERICH6BQ5W0A0 696 aa24.56■■□□□ 1.52
VARS-224ENST00000479051 OTUD7BQ6GQQ9 843 aa24.56■■□□□ 1.52
VARS-224ENST00000479051 GIMAP6Q6P9H5 292 aa24.56■■□□□ 1.52
VARS-224ENST00000479051 SAGE1Q9NXZ1 904 aa24.56■■□□□ 1.52
VARS-224ENST00000479051 TAOK2Q9UL54 1235 aa24.56■■□□□ 1.52
VARS-224ENST00000479051 DDX60LQ5H9U9 1706 aaKnown RBP24.55■■□□□ 1.52
VARS-224ENST00000479051 HIP1O00291 1037 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 APPP05067 770 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 CAP2P40123 477 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 SNAPC2Q13487 334 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 NACAP1Q9BZK3 213 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 HELLSQ9NRZ9 838 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 GINM1Q9NU53 330 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 ARPP21Q9UBL0 812 aaPredicted RBP24.55■■□□□ 1.52
VARS-224ENST00000479051 SIPA1L1O43166 1804 aa24.55■■□□□ 1.52
VARS-224ENST00000479051 DOCK1Q14185 1865 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 FOXN1O15353 648 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 PTPRAP18433 802 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 PLCD1P51178 756 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 TTC22Q5TAA0 569 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 SEC62Q99442 399 aaKnown RBP24.54■■□□□ 1.52
VARS-224ENST00000479051 TBC1D2Q9BYX2 928 aa24.54■■□□□ 1.52
VARS-224ENST00000479051 PATL2C9JE40 543 aaKnown RBP24.53■■□□□ 1.52
VARS-224ENST00000479051 IRF6O14896 467 aa24.53■■□□□ 1.52
VARS-224ENST00000479051 ASNSP08243 561 aa24.53■■□□□ 1.52
VARS-224ENST00000479051 CETPP11597 493 aa24.53■■□□□ 1.52
VARS-224ENST00000479051 DNAJC18Q9H819 358 aa24.53■■□□□ 1.52
VARS-224ENST00000479051 ZHX2Q9Y6X8 837 aa24.53■■□□□ 1.52
VARS-224ENST00000479051 CCL15-CCL14A0A0B4J2E2 113 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 TESPA1A2RU30 521 aaPredicted RBP24.52■■□□□ 1.52
VARS-224ENST00000479051 GSG1L2A8MUP6 293 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 USP17L12C9JPN9 530 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 USP17L21D6R901 530 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 TDO2P48775 406 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 CCL15Q16663 113 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 MCMDC2Q4G0Z9 681 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 MS4A4AQ96JQ5 239 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 DIAPH3Q9NSV4 1193 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 RNF186Q9NXI6 227 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 SWAP70Q9UH65 585 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 LAMB1P07942 1786 aa24.52■■□□□ 1.52
VARS-224ENST00000479051 CXCL11O14625 94 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 TRPA1O75762 1119 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 SDSP20132 328 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 C12orf60Q5U649 245 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 TATDN1Q6P1N9 297 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 IFNL1Q8IU54 200 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 KCNH4Q9UQ05 1017 aa24.51■■□□□ 1.51
VARS-224ENST00000479051 CYP2D6P10635 497 aa24.5■■□□□ 1.51
VARS-224ENST00000479051 MFAP1P55081 439 aaKnown RBP24.5■■□□□ 1.51
VARS-224ENST00000479051 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
VARS-224ENST00000479051 CERKLQ49MI3 558 aaPredicted RBP24.5■■□□□ 1.51
VARS-224ENST00000479051 CTR9Q6PD62 1173 aa24.5■■□□□ 1.51
VARS-224ENST00000479051 AS3MTQ9HBK9 375 aa24.5■■□□□ 1.51
VARS-224ENST00000479051 BAZ2AQ9UIF9 1905 aaKnown RBP24.5■■□□□ 1.51
VARS-224ENST00000479051 PCNTO95613 3336 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms